Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tA(AGC)FtA(AGC)F 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)GtA(AGC)G 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)HtA(AGC)H 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)JtA(AGC)J 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)K1tA(AGC)K1 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)K2tA(AGC)K2 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)LtA(AGC)L 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)M1tA(AGC)M1 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)M2tA(AGC)M2 73 nt6.64□□□□□ -1.35
LSM1P47017 tA(AGC)PtA(AGC)P 73 nt6.64□□□□□ -1.35
LSM1P47017 EFM1YHL039W 1758 nt6.64□□□□□ -1.35
LSM1P47017 VBA5YKR105C 1749 nt6.63□□□□□ -1.35
LSM1P47017 IPL1YPL209C 1104 nt6.63□□□□□ -1.35
LSM1P47017 HNM1YGL077C 1692 nt6.62□□□□□ -1.35
LSM1P47017 YHR033WYHR033W 1272 nt6.62□□□□□ -1.35
LSM1P47017 YLR112WYLR112W 420 nt6.62□□□□□ -1.35
LSM1P47017 STP3YLR375W 1032 nt6.62□□□□□ -1.35
LSM1P47017 RSP5YER125W 2430 nt6.61□□□□□ -1.35
LSM1P47017 GPA1YHR005C 1419 nt6.61□□□□□ -1.35
LSM1P47017 ARG7YMR062C 1326 nt6.61□□□□□ -1.35
LSM1P47017 HAL5YJL165C 2568 nt6.61□□□□□ -1.35
LSM1P47017 DAL4YIR028W 1908 nt6.61□□□□□ -1.35
LSM1P47017 ADH7YCR105W 1086 nt6.61□□□□□ -1.35
LSM1P47017 PRY2YKR013W 990 nt6.61□□□□□ -1.35
LSM1P47017 YLR349WYLR349W 507 nt6.61□□□□□ -1.35
LSM1P47017 SMK1YPR054W 1167 nt6.6□□□□□ -1.35
LSM1P47017 TIM50YPL063W 1431 nt6.59□□□□□ -1.35
LSM1P47017 FCY2YER056C 1602 nt6.59□□□□□ -1.35
LSM1P47017 NAP1YKR048C 1254 nt6.59□□□□□ -1.35
LSM1P47017 YCR025CYCR025C 411 nt6.58□□□□□ -1.36
LSM1P47017 RRT14YIL127C 621 nt6.58□□□□□ -1.36
LSM1P47017 PMU1YKL128C 888 nt6.58□□□□□ -1.36
LSM1P47017 LSP1YPL004C 1026 nt6.58□□□□□ -1.36
LSM1P47017 RGT2YDL138W 2292 nt6.58□□□□□ -1.36
LSM1P47017 CDC3YLR314C 1563 nt6.57□□□□□ -1.36
LSM1P47017 VMA2YBR127C 1554 nt6.57□□□□□ -1.36
LSM1P47017 CAR2YLR438W 1275 nt6.57□□□□□ -1.36
LSM1P47017 YMR206WYMR206W 942 nt6.57□□□□□ -1.36
LSM1P47017 TKL2YBR117C 2046 nt6.57□□□□□ -1.36
LSM1P47017 NOG2YNR053C 1461 nt6.56□□□□□ -1.36
LSM1P47017 YDR327WYDR327W 327 nt6.56□□□□□ -1.36
LSM1P47017 DST1YGL043W 930 nt6.56□□□□□ -1.36
LSM1P47017 QCR6YFR033C 444 nt6.55□□□□□ -1.36
LSM1P47017 PAU15YIR041W 375 nt6.55□□□□□ -1.36
LSM1P47017 PGC1YPL206C 966 nt6.55□□□□□ -1.36
LSM1P47017 YPC1YBR183W 951 nt6.55□□□□□ -1.36
LSM1P47017 NUP57YGR119C 1626 nt6.54□□□□□ -1.36
LSM1P47017 GTT3YEL017W 1014 nt6.54□□□□□ -1.36
LSM1P47017 YGR210CYGR210C 1236 nt6.54□□□□□ -1.36
LSM1P47017 VPS65YLR322W 315 nt6.54□□□□□ -1.36
LSM1P47017 YAH1YPL252C 519 nt6.54□□□□□ -1.36
LSM1P47017 CYB2YML054C 1776 nt6.54□□□□□ -1.36
LSM1P47017 HTS1YPR033C 1641 nt6.54□□□□□ -1.36
LSM1P47017 GRH1YDR517W 1119 nt6.53□□□□□ -1.36
LSM1P47017 HGH1YGR187C 1185 nt6.53□□□□□ -1.36
LSM1P47017 SER2YGR208W 930 nt6.53□□□□□ -1.36
LSM1P47017 ERV25YML012W 636 nt6.53□□□□□ -1.36
LSM1P47017 BXI1YNL305C 894 nt6.53□□□□□ -1.36
LSM1P47017 YPR084WYPR084W 1371 nt6.53□□□□□ -1.36
LSM1P47017 YLL058WYLL058W 1728 nt6.53□□□□□ -1.36
LSM1P47017 JHD1YER051W 1479 nt6.53□□□□□ -1.36
LSM1P47017 tS(GCU)LtS(GCU)L 80 nt6.52□□□□□ -1.37
LSM1P47017 NTG1YAL015C 1200 nt6.52□□□□□ -1.37
LSM1P47017 MCH2YKL221W 1422 nt6.51□□□□□ -1.37
LSM1P47017 TGA1tA(UGC)A 73 nt6.51□□□□□ -1.37
LSM1P47017 tA(UGC)EtA(UGC)E 73 nt6.51□□□□□ -1.37
LSM1P47017 tA(UGC)GtA(UGC)G 73 nt6.51□□□□□ -1.37
LSM1P47017 tA(UGC)LtA(UGC)L 73 nt6.51□□□□□ -1.37
LSM1P47017 tA(UGC)OtA(UGC)O 73 nt6.51□□□□□ -1.37
LSM1P47017 FPR2YDR519W 408 nt6.51□□□□□ -1.37
LSM1P47017 YPL108WYPL108W 507 nt6.51□□□□□ -1.37
LSM1P47017 ARC35YNR035C 1029 nt6.5□□□□□ -1.37
LSM1P47017 FCY1YPR062W 477 nt6.5□□□□□ -1.37
LSM1P47017 AIM3YBR108W 2844 nt6.49□□□□□ -1.37
LSM1P47017 YDR215CYDR215C 414 nt6.49□□□□□ -1.37
LSM1P47017 CTF8YHR191C 402 nt6.49□□□□□ -1.37
LSM1P47017 YKL147CYKL147C 618 nt6.49□□□□□ -1.37
LSM1P47017 CBK1YNL161W 2271 nt6.49□□□□□ -1.37
LSM1P47017 HXT2YMR011W 1626 nt6.49□□□□□ -1.37
LSM1P47017 ERG24YNL280C 1317 nt6.49□□□□□ -1.37
LSM1P47017 TOS1YBR162C 1368 nt6.48□□□□□ -1.37
LSM1P47017 LIP5YOR196C 1245 nt6.48□□□□□ -1.37
LSM1P47017 YGL260WYGL260W 231 nt6.47□□□□□ -1.37
LSM1P47017 MTR3YGR158C 753 nt6.47□□□□□ -1.37
LSM1P47017 CPR2YHR057C 618 nt6.47□□□□□ -1.37
LSM1P47017 RPL2BYIL018W 765 nt6.47□□□□□ -1.37
LSM1P47017 RPS6AYPL090C 711 nt6.46□□□□□ -1.38
LSM1P47017 RPS6BYBR181C 711 nt6.46□□□□□ -1.38
LSM1P47017 YBR232CYBR232C 360 nt6.46□□□□□ -1.38
LSM1P47017 ERP2YAL007C 648 nt6.45□□□□□ -1.38
LSM1P47017 DAL80YKR034W 810 nt6.45□□□□□ -1.38
LSM1P47017 OPI11YPR044C 354 nt6.45□□□□□ -1.38
LSM1P47017 EXG2YDR261C 1689 nt6.45□□□□□ -1.38
LSM1P47017 YML034C-AYML034C-A 399 nt6.44□□□□□ -1.38
LSM1P47017 FET4YMR319C 1659 nt6.44□□□□□ -1.38
LSM1P47017 ARP3YJR065C 1350 nt6.44□□□□□ -1.38
LSM1P47017 YBR241CYBR241C 1467 nt6.43□□□□□ -1.38
LSM1P47017 Q0010Q0010 387 nt6.43□□□□□ -1.38
LSM1P47017 HOG1YLR113W 1308 nt6.43□□□□□ -1.38
LSM1P47017 MLS1YNL117W 1665 nt6.42□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms