Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 POLR1A-204ENST00000424089 576 ntTSL 311.05□□□□□ -0.643e-7■■□□□ 14.3
EIF3DO15371 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC10.88□□□□□ -0.673e-7■■□□□ 14.3
EIF3DO15371 POLR1A-202ENST00000409024 560 ntTSL 310.86□□□□□ -0.673e-7■■□□□ 14.3
EIF3DO15371 TJP2-203ENST00000377259 588 ntTSL 310.81□□□□□ -0.683e-7■■□□□ 14.3
EIF3DO15371 POLR1A-208ENST00000486964 1427 ntTSL 510.49□□□□□ -0.733e-7■■□□□ 14.3
EIF3DO15371 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 510.3□□□□□ -0.761e-9■■□□□ 14.3
EIF3DO15371 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.941e-9■■□□□ 14.3
EIF3DO15371 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.941e-9■■□□□ 14.3
EIF3DO15371 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.031e-9■■□□□ 14.3
EIF3DO15371 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.61□□□□□ -1.032e-10■■□□□ 14.3
EIF3DO15371 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.193e-7■■□□□ 14.3
EIF3DO15371 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.95□□□□□ -1.32e-10■■□□□ 14.3
EIF3DO15371 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.632e-10■■□□□ 14.3
EIF3DO15371 NASP-222ENST00000534101 754 ntTSL 34.47□□□□□ -1.691e-9■■□□□ 14.3
EIF3DO15371 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.982e-10■■□□□ 14.3
EIF3DO15371 EHBP1-204ENST00000405482 1311 ntTSL 224.4■■□□□ 1.58e-10■■□□□ 14.2
EIF3DO15371 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.938e-10■■□□□ 14.2
EIF3DO15371 EHBP1-205ENST00000413434 533 ntTSL 410.88□□□□□ -0.678e-10■■□□□ 14.2
EIF3DO15371 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.778e-10■■□□□ 14.2
EIF3DO15371 EHBP1-217ENST00000472809 1374 ntTSL 510.25□□□□□ -0.778e-10■■□□□ 14.2
EIF3DO15371 EHBP1-211ENST00000449820 539 ntTSL 59.83□□□□□ -0.848e-10■■□□□ 14.2
EIF3DO15371 EHBP1-207ENST00000426940 586 ntTSL 48.2□□□□□ -1.18e-10■■□□□ 14.2
EIF3DO15371 EHBP1-208ENST00000427809 581 ntTSL 46.05□□□□□ -1.448e-10■■□□□ 14.2
EIF3DO15371 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.618e-10■■□□□ 14.2
EIF3DO15371 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)4.7□□□□□ -1.668e-10■■□□□ 14.2
EIF3DO15371 MAD1L1-215ENST00000464742 449 ntTSL 517.72■□□□□ 0.432e-6■■□□□ 14.2
EIF3DO15371 MAD1L1-222ENST00000491858 494 ntTSL 413.85□□□□□ -0.192e-6■■□□□ 14.2
EIF3DO15371 EIF4G1-233ENST00000475721 1271 ntTSL 221.51■■□□□ 1.032e-7■■□□□ 14.2
EIF3DO15371 RPH3AL-206ENST00000570954 568 ntTSL 413.51□□□□□ -0.252e-6■■□□□ 14.2
EIF3DO15371 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.216e-7■■□□□ 14.2
EIF3DO15371 CSNK1G2-209ENST00000591752 648 ntTSL 518.37■□□□□ 0.536e-7■■□□□ 14.2
EIF3DO15371 VAV2-205ENST00000486113 523 ntTSL 213.76□□□□□ -0.213e-6■■□□□ 14.1
EIF3DO15371 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.41e-6■■□□□ 14.1
EIF3DO15371 PAH-212ENST00000551337 675 ntTSL 320.03■□□□□ 0.85e-13■■□□□ 14.1
EIF3DO15371 PAH-203ENST00000546844 705 ntTSL 313.9□□□□□ -0.185e-13■■□□□ 14.1
EIF3DO15371 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.695e-13■■□□□ 14.1
EIF3DO15371 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.21□□□□□ -1.095e-13■■□□□ 14.1
EIF3DO15371 PAH-213ENST00000551988 584 ntTSL 37.87□□□□□ -1.155e-13■■□□□ 14.1
EIF3DO15371 PAH-207ENST00000549111 1252 ntTSL 1 (best)7.37□□□□□ -1.235e-13■■□□□ 14.1
EIF3DO15371 PAH-206ENST00000548928 472 ntTSL 34.89□□□□□ -1.635e-13■■□□□ 14.1
EIF3DO15371 PAH-205ENST00000548677 373 ntTSL 54.1□□□□□ -1.755e-13■■□□□ 14.1
EIF3DO15371 PAH-210ENST00000550978 652 ntTSL 23.59□□□□□ -1.835e-13■■□□□ 14.1
EIF3DO15371 PAH-217ENST00000635500 189 ntTSL 32.03□□□□□ -2.085e-13■■□□□ 14.1
EIF3DO15371 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.32■□□□□ 0.22e-8■■□□□ 14
EIF3DO15371 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.82□□□□□ -0.22e-8■■□□□ 14
EIF3DO15371 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.355e-6■■□□□ 14
EIF3DO15371 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.11■■■□□ 2.732e-6■■□□□ 14
EIF3DO15371 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.912e-6■■□□□ 14
EIF3DO15371 AGAP1-214ENST00000635100 2478 ntTSL 516.7■□□□□ 0.262e-6■■□□□ 14
EIF3DO15371 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.082e-6■■□□□ 14
EIF3DO15371 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.371e-6■■□□□ 14
EIF3DO15371 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC12.15□□□□□ -0.461e-6■■□□□ 14
EIF3DO15371 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.166e-31■■□□□ 14
EIF3DO15371 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.42■□□□□ 0.066e-31■■□□□ 14
EIF3DO15371 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.026e-31■■□□□ 14
EIF3DO15371 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC12.13□□□□□ -0.476e-31■■□□□ 14
EIF3DO15371 NDUFC2-KCTD14-204ENST00000614236 386 ntTSL 5 BASIC11.76□□□□□ -0.536e-31■■□□□ 14
EIF3DO15371 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC11.28□□□□□ -0.66e-31■■□□□ 14
EIF3DO15371 NDUFC2-KCTD14-203ENST00000612612 530 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.676e-31■■□□□ 14
EIF3DO15371 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC9.62□□□□□ -0.876e-31■■□□□ 14
EIF3DO15371 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC9.62□□□□□ -0.876e-31■■□□□ 14
EIF3DO15371 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.349e-7■■□□□ 13.9
EIF3DO15371 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.139e-7■■□□□ 13.9
EIF3DO15371 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 19e-7■■□□□ 13.9
EIF3DO15371 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.979e-7■■□□□ 13.9
EIF3DO15371 NINL-205ENST00000464285 1514 ntTSL 216.84■□□□□ 0.293e-7■■□□□ 13.9
EIF3DO15371 NINL-207ENST00000496509 735 ntTSL 514.51□□□□□ -0.093e-7■■□□□ 13.9
EIF3DO15371 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.123e-7■■□□□ 13.9
EIF3DO15371 KMT2C-204ENST00000418061 710 ntTSL 57.16□□□□□ -1.263e-7■■□□□ 13.9
EIF3DO15371 KMT2C-206ENST00000424877 5874 ntTSL 56.48□□□□□ -1.373e-7■■□□□ 13.9
EIF3DO15371 KMT2C-209ENST00000485241 479 ntTSL 55.64□□□□□ -1.513e-7■■□□□ 13.9
EIF3DO15371 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.963e-7■■□□□ 13.9
EIF3DO15371 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.011e-6■■□□□ 13.9
EIF3DO15371 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.05■□□□□ 0.961e-6■■□□□ 13.9
EIF3DO15371 HDAC4-216ENST00000544989 342 ntTSL 512.83□□□□□ -0.361e-6■■□□□ 13.9
EIF3DO15371 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)12.3□□□□□ -0.441e-6■■□□□ 13.9
EIF3DO15371 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.232e-6■■□□□ 13.9
EIF3DO15371 GPAM-203ENST00000480130 514 ntTSL 26.84□□□□□ -1.312e-6■■□□□ 13.8
EIF3DO15371 DANCR-203ENST00000441504 336 ntTSL 219.06■□□□□ 0.641e-9■■□□□ 13.8
EIF3DO15371 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.22■□□□□ 0.511e-9■■□□□ 13.8
EIF3DO15371 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.14□□□□□ -0.151e-6■■□□□ 13.8
EIF3DO15371 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.341e-6■■□□□ 13.8
EIF3DO15371 AMPD2-213ENST00000524975 678 ntTSL 319.96■□□□□ 0.796e-7■■□□□ 13.8
EIF3DO15371 AMPD2-214ENST00000525415 580 ntTSL 417.37■□□□□ 0.376e-7■■□□□ 13.8
EIF3DO15371 ZCCHC14-202ENST00000561928 2548 ntTSL 516.68■□□□□ 0.266e-7■■□□□ 13.8
EIF3DO15371 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.45■□□□□ 0.226e-7■■□□□ 13.8
EIF3DO15371 CHD8-208ENST00000555301 918 ntTSL 215.7■□□□□ 0.16e-7■■□□□ 13.8
EIF3DO15371 AMPD2-215ENST00000526301 2354 ntTSL 1 (best)15.54■□□□□ 0.086e-7■■□□□ 13.8
EIF3DO15371 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.23■□□□□ 0.036e-7■■□□□ 13.8
EIF3DO15371 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -06e-7■■□□□ 13.8
EIF3DO15371 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.047e-16■■□□□ 13.8
EIF3DO15371 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.89□□□□□ -0.196e-7■■□□□ 13.8
EIF3DO15371 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.236e-7■■□□□ 13.8
EIF3DO15371 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC13.54□□□□□ -0.246e-7■■□□□ 13.8
EIF3DO15371 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.256e-7■■□□□ 13.8
EIF3DO15371 DNMT1-228ENST00000592705 5215 ntTSL 1 (best)13.46□□□□□ -0.256e-7■■□□□ 13.8
EIF3DO15371 ZCCHC14-204ENST00000568020 6242 ntTSL 1 (best)13.39□□□□□ -0.276e-7■■□□□ 13.8
EIF3DO15371 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.87□□□□□ -0.356e-7■■□□□ 13.8
EIF3DO15371 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC12.04□□□□□ -0.486e-7■■□□□ 13.8
EIF3DO15371 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC11.98□□□□□ -0.496e-7■■□□□ 13.8
Retrieved 100 of 4,069 protein–RNA pairs in 230.2 ms