Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12-1A0N8R1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12-1A0N8R1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12-1A0N8R1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12-1A0N8R1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12-1A0N8R1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12-1A0N8R1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav12-1A0N8R1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav12-1A0N8R1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12-1A0N8R1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12-1A0N8R1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12-1A0N8R1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav12-1A0N8R1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav12-1A0N8R1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12-1A0N8R1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12-1A0N8R1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trav12-1A0N8R1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12-1A0N8R1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12-1A0N8R1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12-1A0N8R1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12-1A0N8R1 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.11■□□□□ 0.65
Trav12-1A0N8R1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav12-1A0N8R1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.11■□□□□ 0.65
Trav12-1A0N8R1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12-1A0N8R1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12-1A0N8R1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav12-1A0N8R1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12-1A0N8R1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12-1A0N8R1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12-1A0N8R1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12-1A0N8R1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12-1A0N8R1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav12-1A0N8R1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12-1A0N8R1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12-1A0N8R1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trav12-1A0N8R1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav12-1A0N8R1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav12-1A0N8R1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav12-1A0N8R1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav12-1A0N8R1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav12-1A0N8R1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav12-1A0N8R1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav12-1A0N8R1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav12-1A0N8R1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trav12-1A0N8R1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12-1A0N8R1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12-1A0N8R1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12-1A0N8R1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav12-1A0N8R1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav12-1A0N8R1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Trav12-1A0N8R1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Nkain2-201ENSMUST00000092602 558 ntBASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav12-1A0N8R1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19■□□□□ 0.63
Trav12-1A0N8R1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav12-1A0N8R1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav12-1A0N8R1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19■□□□□ 0.63
Trav12-1A0N8R1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.99■□□□□ 0.63
Trav12-1A0N8R1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav12-1A0N8R1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav12-1A0N8R1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms