Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 SUZ12P1-203ENST00000578195 985 ntBASIC18.6■□□□□ 0.57
TRAV21A0A0B4J279 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV21A0A0B4J279 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 WHAMMP2-203ENST00000563942 1603 ntBASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV21A0A0B4J279 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV21A0A0B4J279 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV21A0A0B4J279 LINC00273-201ENST00000539813 1452 ntBASIC18.58■□□□□ 0.56
TRAV21A0A0B4J279 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRAV21A0A0B4J279 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV21A0A0B4J279 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV21A0A0B4J279 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV21A0A0B4J279 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV21A0A0B4J279 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV21A0A0B4J279 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV21A0A0B4J279 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV21A0A0B4J279 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAV21A0A0B4J279 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV21A0A0B4J279 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV21A0A0B4J279 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV21A0A0B4J279 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV21A0A0B4J279 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 MIR6090-201ENST00000622481 60 ntBASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV21A0A0B4J279 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRAV21A0A0B4J279 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV21A0A0B4J279 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV21A0A0B4J279 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRAV21A0A0B4J279 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV21A0A0B4J279 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV21A0A0B4J279 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV21A0A0B4J279 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV21A0A0B4J279 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV21A0A0B4J279 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV21A0A0B4J279 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 MIR3665-201ENST00000578708 105 ntBASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV21A0A0B4J279 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 DUX4L28-201ENST00000623687 678 ntBASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV21A0A0B4J279 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV21A0A0B4J279 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV21A0A0B4J279 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV21A0A0B4J279 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV21A0A0B4J279 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV21A0A0B4J279 AL449106.1-201ENST00000608517 1980 ntBASIC18.46■□□□□ 0.55
TRAV21A0A0B4J279 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV21A0A0B4J279 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms