Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ighv16-1A0A0A6YW39 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv16-1A0A0A6YW39 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv16-1A0A0A6YW39 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ighv16-1A0A0A6YW39 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv16-1A0A0A6YW39 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.18■□□□□ 0.98
Ighv16-1A0A0A6YW39 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv16-1A0A0A6YW39 Gm45364-201ENSMUST00000210883 159 ntBASIC21.16■□□□□ 0.98
Ighv16-1A0A0A6YW39 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv16-1A0A0A6YW39 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv16-1A0A0A6YW39 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv16-1A0A0A6YW39 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv16-1A0A0A6YW39 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv16-1A0A0A6YW39 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ighv16-1A0A0A6YW39 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv16-1A0A0A6YW39 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv16-1A0A0A6YW39 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.12■□□□□ 0.97
Ighv16-1A0A0A6YW39 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ighv16-1A0A0A6YW39 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.12■□□□□ 0.97
Ighv16-1A0A0A6YW39 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv16-1A0A0A6YW39 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.11■□□□□ 0.97
Ighv16-1A0A0A6YW39 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ighv16-1A0A0A6YW39 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv16-1A0A0A6YW39 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv16-1A0A0A6YW39 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.1■□□□□ 0.97
Ighv16-1A0A0A6YW39 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv16-1A0A0A6YW39 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv16-1A0A0A6YW39 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv16-1A0A0A6YW39 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.09■□□□□ 0.97
Ighv16-1A0A0A6YW39 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv16-1A0A0A6YW39 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv16-1A0A0A6YW39 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv16-1A0A0A6YW39 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv16-1A0A0A6YW39 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Ighv16-1A0A0A6YW39 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv16-1A0A0A6YW39 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv16-1A0A0A6YW39 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
Ighv16-1A0A0A6YW39 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv16-1A0A0A6YW39 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.06■□□□□ 0.96
Ighv16-1A0A0A6YW39 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv16-1A0A0A6YW39 Gm9812-201ENSMUST00000061934 968 ntBASIC21.06■□□□□ 0.96
Ighv16-1A0A0A6YW39 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv16-1A0A0A6YW39 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv16-1A0A0A6YW39 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv16-1A0A0A6YW39 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv16-1A0A0A6YW39 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv16-1A0A0A6YW39 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.05■□□□□ 0.96
Ighv16-1A0A0A6YW39 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv16-1A0A0A6YW39 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv16-1A0A0A6YW39 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv16-1A0A0A6YW39 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv16-1A0A0A6YW39 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Scarna2-201ENSMUST00000157560 414 ntBASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv16-1A0A0A6YW39 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv16-1A0A0A6YW39 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Ighv16-1A0A0A6YW39 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv16-1A0A0A6YW39 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv16-1A0A0A6YW39 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ighv16-1A0A0A6YW39 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv16-1A0A0A6YW39 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Gm11175-201ENSMUST00000116172 543 ntBASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv16-1A0A0A6YW39 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv16-1A0A0A6YW39 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ighv16-1A0A0A6YW39 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv16-1A0A0A6YW39 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv16-1A0A0A6YW39 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv16-1A0A0A6YW39 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv16-1A0A0A6YW39 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv16-1A0A0A6YW39 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Ighv16-1A0A0A6YW39 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms