Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav4-4-dv10A0A075B651 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav4-4-dv10A0A075B651 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav4-4-dv10A0A075B651 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav4-4-dv10A0A075B651 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav4-4-dv10A0A075B651 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav4-4-dv10A0A075B651 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav4-4-dv10A0A075B651 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav4-4-dv10A0A075B651 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4-4-dv10A0A075B651 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4-4-dv10A0A075B651 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav4-4-dv10A0A075B651 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4-4-dv10A0A075B651 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.85■□□□□ 0.45
Trav4-4-dv10A0A075B651 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav4-4-dv10A0A075B651 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav4-4-dv10A0A075B651 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav4-4-dv10A0A075B651 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav4-4-dv10A0A075B651 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav4-4-dv10A0A075B651 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav4-4-dv10A0A075B651 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav4-4-dv10A0A075B651 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav4-4-dv10A0A075B651 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav4-4-dv10A0A075B651 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-4-dv10A0A075B651 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-4-dv10A0A075B651 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-4-dv10A0A075B651 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4-4-dv10A0A075B651 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav4-4-dv10A0A075B651 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav4-4-dv10A0A075B651 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4-4-dv10A0A075B651 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4-4-dv10A0A075B651 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav4-4-dv10A0A075B651 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.77■□□□□ 0.43
Trav4-4-dv10A0A075B651 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4-4-dv10A0A075B651 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4-4-dv10A0A075B651 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Gm45855-201ENSMUST00000212546 880 ntBASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-4-dv10A0A075B651 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav4-4-dv10A0A075B651 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-4-dv10A0A075B651 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms