RNA–Protein interactions for RNA: ENST00000639148.1

SLC35A3-215, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 1,644 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-215ENST00000639148 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
SLC35A3-215ENST00000639148 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
SLC35A3-215ENST00000639148 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
SLC35A3-215ENST00000639148 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
SLC35A3-215ENST00000639148 POTEDQ86YR6 584 aa20.08■□□□□ 0.8
SLC35A3-215ENST00000639148 FOXD1Q16676 465 aa20.02■□□□□ 0.79
SLC35A3-215ENST00000639148 MSH5O43196 834 aa19.18■□□□□ 0.66
SLC35A3-215ENST00000639148 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
SLC35A3-215ENST00000639148 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
SLC35A3-215ENST00000639148 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
SLC35A3-215ENST00000639148 ADRA2BP18089 450 aa17.9■□□□□ 0.46
SLC35A3-215ENST00000639148 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
SLC35A3-215ENST00000639148 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
SLC35A3-215ENST00000639148 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
SLC35A3-215ENST00000639148 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
SLC35A3-215ENST00000639148 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
SLC35A3-215ENST00000639148 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
SLC35A3-215ENST00000639148 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
SLC35A3-215ENST00000639148 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
SLC35A3-215ENST00000639148 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
SLC35A3-215ENST00000639148 POTEHQ6S545 545 aa15.58■□□□□ 0.09
SLC35A3-215ENST00000639148 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.09
SLC35A3-215ENST00000639148 PPP4R3CPQ6ZMV5 832 aa15.54■□□□□ 0.08
SLC35A3-215ENST00000639148 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
SLC35A3-215ENST00000639148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
SLC35A3-215ENST00000639148 DSG3P32926 999 aa14.89□□□□□ -0.03
SLC35A3-215ENST00000639148 CAPN15O75808 1086 aa14.77□□□□□ -0.04
SLC35A3-215ENST00000639148 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.04
SLC35A3-215ENST00000639148 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
SLC35A3-215ENST00000639148 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
SLC35A3-215ENST00000639148 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
SLC35A3-215ENST00000639148 APLP2Q06481 763 aa14.37□□□□□ -0.11
SLC35A3-215ENST00000639148 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
SLC35A3-215ENST00000639148 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.11
SLC35A3-215ENST00000639148 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
SLC35A3-215ENST00000639148 ABCB7O75027 752 aa14.3□□□□□ -0.12
SLC35A3-215ENST00000639148 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.12
SLC35A3-215ENST00000639148 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
SLC35A3-215ENST00000639148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
SLC35A3-215ENST00000639148 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
SLC35A3-215ENST00000639148 SLC4A2P04920 1241 aa14□□□□□ -0.17
SLC35A3-215ENST00000639148 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
SLC35A3-215ENST00000639148 KCNA4P22459 653 aa13.79□□□□□ -0.2
SLC35A3-215ENST00000639148 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
SLC35A3-215ENST00000639148 HAX1O00165 279 aa13.73□□□□□ -0.21
SLC35A3-215ENST00000639148 POLA2Q14181 598 aa13.73□□□□□ -0.21
SLC35A3-215ENST00000639148 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
SLC35A3-215ENST00000639148 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
SLC35A3-215ENST00000639148 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
SLC35A3-215ENST00000639148 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
SLC35A3-215ENST00000639148 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
SLC35A3-215ENST00000639148 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
SLC35A3-215ENST00000639148 EVX2Q03828 476 aa13.4□□□□□ -0.26
SLC35A3-215ENST00000639148 LHX8Q68G74 356 aa13.33□□□□□ -0.28
SLC35A3-215ENST00000639148 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
SLC35A3-215ENST00000639148 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
SLC35A3-215ENST00000639148 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
SLC35A3-215ENST00000639148 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
SLC35A3-215ENST00000639148 GABBR2O75899 941 aa13.13□□□□□ -0.31
SLC35A3-215ENST00000639148 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
SLC35A3-215ENST00000639148 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SLC35A3-215ENST00000639148 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
SLC35A3-215ENST00000639148 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
SLC35A3-215ENST00000639148 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
SLC35A3-215ENST00000639148 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
SLC35A3-215ENST00000639148 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
SLC35A3-215ENST00000639148 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
SLC35A3-215ENST00000639148 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
SLC35A3-215ENST00000639148 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
SLC35A3-215ENST00000639148 CLCN6P51797 869 aa12.8□□□□□ -0.36
SLC35A3-215ENST00000639148 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
SLC35A3-215ENST00000639148 FBLN2P98095 1184 aa12.78□□□□□ -0.36
SLC35A3-215ENST00000639148 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
SLC35A3-215ENST00000639148 ZBTB22O15209 634 aa12.7□□□□□ -0.38
SLC35A3-215ENST00000639148 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
SLC35A3-215ENST00000639148 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
SLC35A3-215ENST00000639148 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
SLC35A3-215ENST00000639148 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
SLC35A3-215ENST00000639148 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
SLC35A3-215ENST00000639148 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
SLC35A3-215ENST00000639148 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SLC35A3-215ENST00000639148 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
SLC35A3-215ENST00000639148 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
SLC35A3-215ENST00000639148 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
SLC35A3-215ENST00000639148 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
SLC35A3-215ENST00000639148 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
SLC35A3-215ENST00000639148 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
SLC35A3-215ENST00000639148 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLC35A3-215ENST00000639148 POTEB2H3BUK9 544 aa12.33□□□□□ -0.43
SLC35A3-215ENST00000639148 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.43
SLC35A3-215ENST00000639148 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.44
SLC35A3-215ENST00000639148 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
SLC35A3-215ENST00000639148 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
SLC35A3-215ENST00000639148 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
SLC35A3-215ENST00000639148 C7P10643 843 aa12.08□□□□□ -0.48
SLC35A3-215ENST00000639148 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
SLC35A3-215ENST00000639148 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
SLC35A3-215ENST00000639148 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
SLC35A3-215ENST00000639148 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
SLC35A3-215ENST00000639148 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms