RNA–Protein interactions for RNA: ENST00000636253.1

EFHC1-216, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-216ENST00000636253 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
EFHC1-216ENST00000636253 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
EFHC1-216ENST00000636253 PHF23Q9BUL5 403 aaPredicted RBP25.47■■□□□ 1.67
EFHC1-216ENST00000636253 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
EFHC1-216ENST00000636253 FOXD1Q16676 465 aa23.51■■□□□ 1.35
EFHC1-216ENST00000636253 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
EFHC1-216ENST00000636253 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
EFHC1-216ENST00000636253 ADRA2BP18089 450 aa22.47■■□□□ 1.19
EFHC1-216ENST00000636253 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
EFHC1-216ENST00000636253 MSH5O43196 834 aa21.77■■□□□ 1.08
EFHC1-216ENST00000636253 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
EFHC1-216ENST00000636253 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
EFHC1-216ENST00000636253 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
EFHC1-216ENST00000636253 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
EFHC1-216ENST00000636253 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
EFHC1-216ENST00000636253 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
EFHC1-216ENST00000636253 KCNA4P22459 653 aa20.03■□□□□ 0.8
EFHC1-216ENST00000636253 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
EFHC1-216ENST00000636253 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
EFHC1-216ENST00000636253 RNF216Q9NWF9 866 aaPredicted RBP19.78■□□□□ 0.76
EFHC1-216ENST00000636253 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
EFHC1-216ENST00000636253 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
EFHC1-216ENST00000636253 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
EFHC1-216ENST00000636253 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
EFHC1-216ENST00000636253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■■■□ 23.3
EFHC1-216ENST00000636253 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
EFHC1-216ENST00000636253 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
EFHC1-216ENST00000636253 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
EFHC1-216ENST00000636253 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
EFHC1-216ENST00000636253 ZBTB22O15209 634 aa18.44■□□□□ 0.54
EFHC1-216ENST00000636253 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
EFHC1-216ENST00000636253 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
EFHC1-216ENST00000636253 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
EFHC1-216ENST00000636253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
EFHC1-216ENST00000636253 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
EFHC1-216ENST00000636253 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
EFHC1-216ENST00000636253 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
EFHC1-216ENST00000636253 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
EFHC1-216ENST00000636253 APLP2Q06481 763 aa18.08■□□□□ 0.48
EFHC1-216ENST00000636253 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
EFHC1-216ENST00000636253 CAPN15O75808 1086 aa17.93■□□□□ 0.46
EFHC1-216ENST00000636253 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
EFHC1-216ENST00000636253 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
EFHC1-216ENST00000636253 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
EFHC1-216ENST00000636253 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
EFHC1-216ENST00000636253 DSG3P32926 999 aa17.67■□□□□ 0.42
EFHC1-216ENST00000636253 ABCB7O75027 752 aa17.57■□□□□ 0.4
EFHC1-216ENST00000636253 POLA2Q14181 598 aa17.49■□□□□ 0.39
EFHC1-216ENST00000636253 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
EFHC1-216ENST00000636253 FBLN2P98095 1184 aa17.1■□□□□ 0.33
EFHC1-216ENST00000636253 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
EFHC1-216ENST00000636253 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
EFHC1-216ENST00000636253 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
EFHC1-216ENST00000636253 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
EFHC1-216ENST00000636253 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
EFHC1-216ENST00000636253 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
EFHC1-216ENST00000636253 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
EFHC1-216ENST00000636253 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
EFHC1-216ENST00000636253 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
EFHC1-216ENST00000636253 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
EFHC1-216ENST00000636253 FKBP8Q14318 412 aa16.47■□□□□ 0.23
EFHC1-216ENST00000636253 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
EFHC1-216ENST00000636253 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
EFHC1-216ENST00000636253 PROM2Q8N271 834 aa16.34■□□□□ 0.21
EFHC1-216ENST00000636253 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
EFHC1-216ENST00000636253 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
EFHC1-216ENST00000636253 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
EFHC1-216ENST00000636253 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
EFHC1-216ENST00000636253 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
EFHC1-216ENST00000636253 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
EFHC1-216ENST00000636253 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
EFHC1-216ENST00000636253 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
EFHC1-216ENST00000636253 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
EFHC1-216ENST00000636253 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
EFHC1-216ENST00000636253 POTEHQ6S545 545 aa15.84■□□□□ 0.13
EFHC1-216ENST00000636253 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
EFHC1-216ENST00000636253 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
EFHC1-216ENST00000636253 VASPP50552 380 aaPredicted RBP15.74■□□□□ 0.11
EFHC1-216ENST00000636253 MIER1Q8N108 512 aa15.73■□□□□ 0.11
EFHC1-216ENST00000636253 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
EFHC1-216ENST00000636253 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
EFHC1-216ENST00000636253 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
EFHC1-216ENST00000636253 MNX1P50219 401 aaPredicted RBP15.63■□□□□ 0.09
EFHC1-216ENST00000636253 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.08
EFHC1-216ENST00000636253 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
EFHC1-216ENST00000636253 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
EFHC1-216ENST00000636253 HAX1O00165 279 aa15.46■□□□□ 0.07
EFHC1-216ENST00000636253 KLHL34Q8N239 644 aa15.46■□□□□ 0.07
EFHC1-216ENST00000636253 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
EFHC1-216ENST00000636253 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
EFHC1-216ENST00000636253 NUBP1P53384 320 aa15.36■□□□□ 0.05
EFHC1-216ENST00000636253 SPOCK2Q92563 424 aa15.34■□□□□ 0.05
EFHC1-216ENST00000636253 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
EFHC1-216ENST00000636253 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
EFHC1-216ENST00000636253 EVX2Q03828 476 aa15.31■□□□□ 0.04
EFHC1-216ENST00000636253 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
EFHC1-216ENST00000636253 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
EFHC1-216ENST00000636253 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
EFHC1-216ENST00000636253 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
EFHC1-216ENST00000636253 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms