RNA–Protein interactions for RNA: ENST00000612494.4

ZNHIT3-201, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 3

Gene ZNHIT3, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-201ENST00000612494 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
ZNHIT3-201ENST00000612494 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
ZNHIT3-201ENST00000612494 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
ZNHIT3-201ENST00000612494 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
ZNHIT3-201ENST00000612494 FOXD1Q16676 465 aa21.09■□□□□ 0.97
ZNHIT3-201ENST00000612494 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
ZNHIT3-201ENST00000612494 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
ZNHIT3-201ENST00000612494 ADRA2BP18089 450 aa20.15■□□□□ 0.82
ZNHIT3-201ENST00000612494 PIAS4Q8N2W9 510 aaPredicted RBP19.86■□□□□ 0.77
ZNHIT3-201ENST00000612494 MSH5O43196 834 aa19.55■□□□□ 0.72
ZNHIT3-201ENST00000612494 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
ZNHIT3-201ENST00000612494 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
ZNHIT3-201ENST00000612494 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
ZNHIT3-201ENST00000612494 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
ZNHIT3-201ENST00000612494 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
ZNHIT3-201ENST00000612494 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
ZNHIT3-201ENST00000612494 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
ZNHIT3-201ENST00000612494 KCNA4P22459 653 aa17.92■□□□□ 0.46
ZNHIT3-201ENST00000612494 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
ZNHIT3-201ENST00000612494 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
ZNHIT3-201ENST00000612494 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
ZNHIT3-201ENST00000612494 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
ZNHIT3-201ENST00000612494 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
ZNHIT3-201ENST00000612494 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
ZNHIT3-201ENST00000612494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
ZNHIT3-201ENST00000612494 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
ZNHIT3-201ENST00000612494 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
ZNHIT3-201ENST00000612494 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
ZNHIT3-201ENST00000612494 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
ZNHIT3-201ENST00000612494 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
ZNHIT3-201ENST00000612494 ZBTB22O15209 634 aa16.48■□□□□ 0.23
ZNHIT3-201ENST00000612494 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
ZNHIT3-201ENST00000612494 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
ZNHIT3-201ENST00000612494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
ZNHIT3-201ENST00000612494 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
ZNHIT3-201ENST00000612494 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
ZNHIT3-201ENST00000612494 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
ZNHIT3-201ENST00000612494 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
ZNHIT3-201ENST00000612494 APLP2Q06481 763 aa16.23■□□□□ 0.19
ZNHIT3-201ENST00000612494 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
ZNHIT3-201ENST00000612494 CAPN15O75808 1086 aa16.09■□□□□ 0.17
ZNHIT3-201ENST00000612494 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
ZNHIT3-201ENST00000612494 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
ZNHIT3-201ENST00000612494 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
ZNHIT3-201ENST00000612494 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
ZNHIT3-201ENST00000612494 DSG3P32926 999 aa15.86■□□□□ 0.13
ZNHIT3-201ENST00000612494 ABCB7O75027 752 aa15.73■□□□□ 0.11
ZNHIT3-201ENST00000612494 POLA2Q14181 598 aa15.68■□□□□ 0.1
ZNHIT3-201ENST00000612494 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
ZNHIT3-201ENST00000612494 FBLN2P98095 1184 aa15.33■□□□□ 0.04
ZNHIT3-201ENST00000612494 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
ZNHIT3-201ENST00000612494 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
ZNHIT3-201ENST00000612494 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
ZNHIT3-201ENST00000612494 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
ZNHIT3-201ENST00000612494 SPDYE6P0CI01 402 aa15.03■□□□□ -0
ZNHIT3-201ENST00000612494 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
ZNHIT3-201ENST00000612494 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
ZNHIT3-201ENST00000612494 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
ZNHIT3-201ENST00000612494 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
ZNHIT3-201ENST00000612494 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
ZNHIT3-201ENST00000612494 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
ZNHIT3-201ENST00000612494 FKBP8Q14318 412 aa14.74□□□□□ -0.05
ZNHIT3-201ENST00000612494 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
ZNHIT3-201ENST00000612494 PROM2Q8N271 834 aa14.62□□□□□ -0.07
ZNHIT3-201ENST00000612494 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
ZNHIT3-201ENST00000612494 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
ZNHIT3-201ENST00000612494 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
ZNHIT3-201ENST00000612494 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
ZNHIT3-201ENST00000612494 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
ZNHIT3-201ENST00000612494 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
ZNHIT3-201ENST00000612494 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
ZNHIT3-201ENST00000612494 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
ZNHIT3-201ENST00000612494 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
ZNHIT3-201ENST00000612494 POTEHQ6S545 545 aa14.23□□□□□ -0.13
ZNHIT3-201ENST00000612494 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
ZNHIT3-201ENST00000612494 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
ZNHIT3-201ENST00000612494 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
ZNHIT3-201ENST00000612494 MIER1Q8N108 512 aa14.11□□□□□ -0.15
ZNHIT3-201ENST00000612494 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
ZNHIT3-201ENST00000612494 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
ZNHIT3-201ENST00000612494 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
ZNHIT3-201ENST00000612494 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
ZNHIT3-201ENST00000612494 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
ZNHIT3-201ENST00000612494 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
ZNHIT3-201ENST00000612494 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
ZNHIT3-201ENST00000612494 HAX1O00165 279 aa13.89□□□□□ -0.19
ZNHIT3-201ENST00000612494 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
ZNHIT3-201ENST00000612494 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
ZNHIT3-201ENST00000612494 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
ZNHIT3-201ENST00000612494 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
ZNHIT3-201ENST00000612494 NUBP1P53384 320 aa13.77□□□□□ -0.21
ZNHIT3-201ENST00000612494 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
ZNHIT3-201ENST00000612494 EVX2Q03828 476 aa13.74□□□□□ -0.21
ZNHIT3-201ENST00000612494 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
ZNHIT3-201ENST00000612494 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
ZNHIT3-201ENST00000612494 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
ZNHIT3-201ENST00000612494 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
ZNHIT3-201ENST00000612494 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
ZNHIT3-201ENST00000612494 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
ZNHIT3-201ENST00000612494 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms