RNA–Protein interactions for RNA: ENST00000611609.1

PCDH9-AS2-202, PCDH9 antisense RNA 2, humanhuman

TSL 5

Gene PCDH9-AS2, Length 162 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS2-202ENST00000611609 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
PCDH9-AS2-202ENST00000611609 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
PCDH9-AS2-202ENST00000611609 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
PCDH9-AS2-202ENST00000611609 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
PCDH9-AS2-202ENST00000611609 FOXD1Q16676 465 aa21.2■□□□□ 0.98
PCDH9-AS2-202ENST00000611609 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
PCDH9-AS2-202ENST00000611609 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
PCDH9-AS2-202ENST00000611609 ADRA2BP18089 450 aa20.21■□□□□ 0.83
PCDH9-AS2-202ENST00000611609 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
PCDH9-AS2-202ENST00000611609 MSH5O43196 834 aa19.69■□□□□ 0.74
PCDH9-AS2-202ENST00000611609 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
PCDH9-AS2-202ENST00000611609 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.56
PCDH9-AS2-202ENST00000611609 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
PCDH9-AS2-202ENST00000611609 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
PCDH9-AS2-202ENST00000611609 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
PCDH9-AS2-202ENST00000611609 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
PCDH9-AS2-202ENST00000611609 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
PCDH9-AS2-202ENST00000611609 KCNA4P22459 653 aa17.93■□□□□ 0.46
PCDH9-AS2-202ENST00000611609 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
PCDH9-AS2-202ENST00000611609 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
PCDH9-AS2-202ENST00000611609 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
PCDH9-AS2-202ENST00000611609 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
PCDH9-AS2-202ENST00000611609 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
PCDH9-AS2-202ENST00000611609 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
PCDH9-AS2-202ENST00000611609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDH9-AS2-202ENST00000611609 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
PCDH9-AS2-202ENST00000611609 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
PCDH9-AS2-202ENST00000611609 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
PCDH9-AS2-202ENST00000611609 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
PCDH9-AS2-202ENST00000611609 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
PCDH9-AS2-202ENST00000611609 ZBTB22O15209 634 aa16.49■□□□□ 0.23
PCDH9-AS2-202ENST00000611609 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
PCDH9-AS2-202ENST00000611609 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
PCDH9-AS2-202ENST00000611609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
PCDH9-AS2-202ENST00000611609 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
PCDH9-AS2-202ENST00000611609 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
PCDH9-AS2-202ENST00000611609 APLP2Q06481 763 aa16.34■□□□□ 0.21
PCDH9-AS2-202ENST00000611609 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
PCDH9-AS2-202ENST00000611609 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
PCDH9-AS2-202ENST00000611609 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
PCDH9-AS2-202ENST00000611609 CAPN15O75808 1086 aa16.15■□□□□ 0.18
PCDH9-AS2-202ENST00000611609 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
PCDH9-AS2-202ENST00000611609 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
PCDH9-AS2-202ENST00000611609 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
PCDH9-AS2-202ENST00000611609 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
PCDH9-AS2-202ENST00000611609 DSG3P32926 999 aa15.94■□□□□ 0.14
PCDH9-AS2-202ENST00000611609 ABCB7O75027 752 aa15.8■□□□□ 0.12
PCDH9-AS2-202ENST00000611609 POLA2Q14181 598 aa15.73■□□□□ 0.11
PCDH9-AS2-202ENST00000611609 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
PCDH9-AS2-202ENST00000611609 FBLN2P98095 1184 aa15.39■□□□□ 0.05
PCDH9-AS2-202ENST00000611609 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
PCDH9-AS2-202ENST00000611609 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
PCDH9-AS2-202ENST00000611609 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
PCDH9-AS2-202ENST00000611609 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
PCDH9-AS2-202ENST00000611609 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
PCDH9-AS2-202ENST00000611609 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
PCDH9-AS2-202ENST00000611609 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
PCDH9-AS2-202ENST00000611609 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
PCDH9-AS2-202ENST00000611609 SSUH2Q9Y2M2 353 aa14.95□□□□□ -0.02
PCDH9-AS2-202ENST00000611609 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
PCDH9-AS2-202ENST00000611609 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
PCDH9-AS2-202ENST00000611609 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCDH9-AS2-202ENST00000611609 FKBP8Q14318 412 aa14.72□□□□□ -0.05
PCDH9-AS2-202ENST00000611609 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
PCDH9-AS2-202ENST00000611609 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
PCDH9-AS2-202ENST00000611609 PROM2Q8N271 834 aa14.66□□□□□ -0.06
PCDH9-AS2-202ENST00000611609 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
PCDH9-AS2-202ENST00000611609 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
PCDH9-AS2-202ENST00000611609 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
PCDH9-AS2-202ENST00000611609 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
PCDH9-AS2-202ENST00000611609 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
PCDH9-AS2-202ENST00000611609 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
PCDH9-AS2-202ENST00000611609 POTEHQ6S545 545 aa14.36□□□□□ -0.11
PCDH9-AS2-202ENST00000611609 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
PCDH9-AS2-202ENST00000611609 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
PCDH9-AS2-202ENST00000611609 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
PCDH9-AS2-202ENST00000611609 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
PCDH9-AS2-202ENST00000611609 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
PCDH9-AS2-202ENST00000611609 FARP1Q9Y4F1 1045 aaPredicted RBP14.11□□□□□ -0.15
PCDH9-AS2-202ENST00000611609 MIER1Q8N108 512 aa14.1□□□□□ -0.15
PCDH9-AS2-202ENST00000611609 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
PCDH9-AS2-202ENST00000611609 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
PCDH9-AS2-202ENST00000611609 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
PCDH9-AS2-202ENST00000611609 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
PCDH9-AS2-202ENST00000611609 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDH9-AS2-202ENST00000611609 HAX1O00165 279 aa13.96□□□□□ -0.17
PCDH9-AS2-202ENST00000611609 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
PCDH9-AS2-202ENST00000611609 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
PCDH9-AS2-202ENST00000611609 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
PCDH9-AS2-202ENST00000611609 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
PCDH9-AS2-202ENST00000611609 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
PCDH9-AS2-202ENST00000611609 NUBP1P53384 320 aa13.79□□□□□ -0.2
PCDH9-AS2-202ENST00000611609 EVX2Q03828 476 aa13.79□□□□□ -0.2
PCDH9-AS2-202ENST00000611609 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
PCDH9-AS2-202ENST00000611609 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 569.2 ms