RNA–Protein interactions for RNA: ENST00000609768.5

CCDC144B-205, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-205ENST00000609768 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
CCDC144B-205ENST00000609768 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
CCDC144B-205ENST00000609768 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
CCDC144B-205ENST00000609768 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
CCDC144B-205ENST00000609768 FOXD1Q16676 465 aa21.46■■□□□ 1.03
CCDC144B-205ENST00000609768 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
CCDC144B-205ENST00000609768 MSH5O43196 834 aa20.3■□□□□ 0.84
CCDC144B-205ENST00000609768 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
CCDC144B-205ENST00000609768 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
CCDC144B-205ENST00000609768 ADRA2BP18089 450 aa19.25■□□□□ 0.67
CCDC144B-205ENST00000609768 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
CCDC144B-205ENST00000609768 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CCDC144B-205ENST00000609768 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
CCDC144B-205ENST00000609768 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
CCDC144B-205ENST00000609768 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
CCDC144B-205ENST00000609768 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
CCDC144B-205ENST00000609768 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CCDC144B-205ENST00000609768 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
CCDC144B-205ENST00000609768 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
CCDC144B-205ENST00000609768 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
CCDC144B-205ENST00000609768 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
CCDC144B-205ENST00000609768 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
CCDC144B-205ENST00000609768 POTEHQ6S545 545 aa16.57■□□□□ 0.24
CCDC144B-205ENST00000609768 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
CCDC144B-205ENST00000609768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC144B-205ENST00000609768 DSG3P32926 999 aa15.93■□□□□ 0.14
CCDC144B-205ENST00000609768 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
CCDC144B-205ENST00000609768 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
CCDC144B-205ENST00000609768 CAPN15O75808 1086 aa15.67■□□□□ 0.1
CCDC144B-205ENST00000609768 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
CCDC144B-205ENST00000609768 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
CCDC144B-205ENST00000609768 ABCB7O75027 752 aa15.29■□□□□ 0.04
CCDC144B-205ENST00000609768 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
CCDC144B-205ENST00000609768 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
CCDC144B-205ENST00000609768 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
CCDC144B-205ENST00000609768 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
CCDC144B-205ENST00000609768 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
CCDC144B-205ENST00000609768 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
CCDC144B-205ENST00000609768 APLP2Q06481 763 aa15□□□□□ -0.01
CCDC144B-205ENST00000609768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
CCDC144B-205ENST00000609768 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
CCDC144B-205ENST00000609768 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
CCDC144B-205ENST00000609768 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
CCDC144B-205ENST00000609768 POLA2Q14181 598 aa14.66□□□□□ -0.06
CCDC144B-205ENST00000609768 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
CCDC144B-205ENST00000609768 HAX1O00165 279 aa14.54□□□□□ -0.08
CCDC144B-205ENST00000609768 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
CCDC144B-205ENST00000609768 EVX2Q03828 476 aa14.49□□□□□ -0.09
CCDC144B-205ENST00000609768 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC144B-205ENST00000609768 KCNA4P22459 653 aa14.44□□□□□ -0.1
CCDC144B-205ENST00000609768 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
CCDC144B-205ENST00000609768 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
CCDC144B-205ENST00000609768 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
CCDC144B-205ENST00000609768 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
CCDC144B-205ENST00000609768 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CCDC144B-205ENST00000609768 LHX8Q68G74 356 aa14.15□□□□□ -0.14
CCDC144B-205ENST00000609768 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
CCDC144B-205ENST00000609768 GABBR2O75899 941 aa14.02□□□□□ -0.17
CCDC144B-205ENST00000609768 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
CCDC144B-205ENST00000609768 PLSCR2Q9NRY7 297 aa13.89□□□□□ -0.19
CCDC144B-205ENST00000609768 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
CCDC144B-205ENST00000609768 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
CCDC144B-205ENST00000609768 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
CCDC144B-205ENST00000609768 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
CCDC144B-205ENST00000609768 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
CCDC144B-205ENST00000609768 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
CCDC144B-205ENST00000609768 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
CCDC144B-205ENST00000609768 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
CCDC144B-205ENST00000609768 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
CCDC144B-205ENST00000609768 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
CCDC144B-205ENST00000609768 FBLN2P98095 1184 aa13.46□□□□□ -0.25
CCDC144B-205ENST00000609768 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
CCDC144B-205ENST00000609768 OTUD5Q96G74 571 aa13.42□□□□□ -0.26
CCDC144B-205ENST00000609768 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
CCDC144B-205ENST00000609768 CLCN6P51797 869 aa13.39□□□□□ -0.27
CCDC144B-205ENST00000609768 POTEMA6NI47 508 aa13.36□□□□□ -0.27
CCDC144B-205ENST00000609768 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
CCDC144B-205ENST00000609768 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
CCDC144B-205ENST00000609768 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
CCDC144B-205ENST00000609768 ZBTB22O15209 634 aa13.35□□□□□ -0.27
CCDC144B-205ENST00000609768 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
CCDC144B-205ENST00000609768 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
CCDC144B-205ENST00000609768 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
CCDC144B-205ENST00000609768 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
CCDC144B-205ENST00000609768 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
CCDC144B-205ENST00000609768 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC144B-205ENST00000609768 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
CCDC144B-205ENST00000609768 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
CCDC144B-205ENST00000609768 LCE2DQ5TA82 110 aaPredicted RBP13.09□□□□□ -0.31
CCDC144B-205ENST00000609768 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
CCDC144B-205ENST00000609768 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
CCDC144B-205ENST00000609768 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
CCDC144B-205ENST00000609768 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
CCDC144B-205ENST00000609768 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
CCDC144B-205ENST00000609768 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
CCDC144B-205ENST00000609768 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-205ENST00000609768 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
CCDC144B-205ENST00000609768 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
CCDC144B-205ENST00000609768 C7P10643 843 aa12.77□□□□□ -0.37
CCDC144B-205ENST00000609768 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms