RNA–Protein interactions for RNA: ENST00000609685.1

SUCO-208, Transcript of SUN domain containing ossification factor, humanhuman

TSL 2

Gene SUCO, Length 761 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-208ENST00000609685 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
SUCO-208ENST00000609685 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
SUCO-208ENST00000609685 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
SUCO-208ENST00000609685 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
SUCO-208ENST00000609685 FOXD1Q16676 465 aa26.53■■□□□ 1.84
SUCO-208ENST00000609685 POTEDQ86YR6 584 aa26.12■■□□□ 1.77
SUCO-208ENST00000609685 MSH5O43196 834 aa25.2■■□□□ 1.62
SUCO-208ENST00000609685 PIAS4Q8N2W9 510 aaPredicted RBP24.6■■□□□ 1.53
SUCO-208ENST00000609685 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
SUCO-208ENST00000609685 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
SUCO-208ENST00000609685 ADRA2BP18089 450 aa23.99■■□□□ 1.43
SUCO-208ENST00000609685 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
SUCO-208ENST00000609685 MAPK8IP2Q13387 824 aaPredicted RBP22.31■■□□□ 1.16
SUCO-208ENST00000609685 CACNB1Q02641 598 aaPredicted RBP22.2■■□□□ 1.14
SUCO-208ENST00000609685 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SUCO-208ENST00000609685 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
SUCO-208ENST00000609685 RNF39Q9H2S5 420 aa21.4■■□□□ 1.02
SUCO-208ENST00000609685 HOXD11P31277 338 aaPredicted RBP21.15■□□□□ 0.98
SUCO-208ENST00000609685 C1QBPQ07021 282 aaKnown RBP21.05■□□□□ 0.96
SUCO-208ENST00000609685 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
SUCO-208ENST00000609685 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
SUCO-208ENST00000609685 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
SUCO-208ENST00000609685 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
SUCO-208ENST00000609685 POTEHQ6S545 545 aa20.3■□□□□ 0.84
SUCO-208ENST00000609685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
SUCO-208ENST00000609685 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
SUCO-208ENST00000609685 DSG3P32926 999 aa19.74■□□□□ 0.75
SUCO-208ENST00000609685 CAPN15O75808 1086 aa19.68■□□□□ 0.74
SUCO-208ENST00000609685 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
SUCO-208ENST00000609685 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
SUCO-208ENST00000609685 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
SUCO-208ENST00000609685 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
SUCO-208ENST00000609685 ABCB7O75027 752 aa19.12■□□□□ 0.65
SUCO-208ENST00000609685 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
SUCO-208ENST00000609685 APLP2Q06481 763 aa19.04■□□□□ 0.64
SUCO-208ENST00000609685 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
SUCO-208ENST00000609685 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
SUCO-208ENST00000609685 CHRDL2Q6WN34 429 aa18.82■□□□□ 0.6
SUCO-208ENST00000609685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
SUCO-208ENST00000609685 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
SUCO-208ENST00000609685 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
SUCO-208ENST00000609685 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
SUCO-208ENST00000609685 POLA2Q14181 598 aa18.41■□□□□ 0.54
SUCO-208ENST00000609685 KCNA4P22459 653 aa18.35■□□□□ 0.53
SUCO-208ENST00000609685 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
SUCO-208ENST00000609685 PIP4P2Q8N4L2 257 aa18.18■□□□□ 0.5
SUCO-208ENST00000609685 HAX1O00165 279 aa18.13■□□□□ 0.49
SUCO-208ENST00000609685 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
SUCO-208ENST00000609685 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
SUCO-208ENST00000609685 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SUCO-208ENST00000609685 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
SUCO-208ENST00000609685 PITPNM1O00562 1244 aa17.89■□□□□ 0.45
SUCO-208ENST00000609685 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
SUCO-208ENST00000609685 EVX2Q03828 476 aa17.78■□□□□ 0.44
SUCO-208ENST00000609685 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
SUCO-208ENST00000609685 LHX8Q68G74 356 aa17.45■□□□□ 0.38
SUCO-208ENST00000609685 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
SUCO-208ENST00000609685 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
SUCO-208ENST00000609685 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
SUCO-208ENST00000609685 GABBR2O75899 941 aa17.35■□□□□ 0.37
SUCO-208ENST00000609685 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
SUCO-208ENST00000609685 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
SUCO-208ENST00000609685 SPDYE2Q495Y8 402 aa17.33■□□□□ 0.36
SUCO-208ENST00000609685 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
SUCO-208ENST00000609685 SPDYE1Q8NFV5 336 aaPredicted RBP17.26■□□□□ 0.35
SUCO-208ENST00000609685 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
SUCO-208ENST00000609685 FBLN2P98095 1184 aa17.16■□□□□ 0.34
SUCO-208ENST00000609685 PLSCR2Q9NRY7 297 aa17.13■□□□□ 0.33
SUCO-208ENST00000609685 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
SUCO-208ENST00000609685 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
SUCO-208ENST00000609685 ATXN8OSP0DMR3 200 aa16.97■□□□□ 0.31
SUCO-208ENST00000609685 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
SUCO-208ENST00000609685 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
SUCO-208ENST00000609685 PRR29P0C7W0 189 aa16.88■□□□□ 0.29
SUCO-208ENST00000609685 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
SUCO-208ENST00000609685 ZBTB22O15209 634 aa16.83■□□□□ 0.28
SUCO-208ENST00000609685 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
SUCO-208ENST00000609685 CLCN6P51797 869 aa16.78■□□□□ 0.28
SUCO-208ENST00000609685 DCBLD2Q96PD2 775 aa16.73■□□□□ 0.27
SUCO-208ENST00000609685 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
SUCO-208ENST00000609685 FARP1Q9Y4F1 1045 aaPredicted RBP16.7■□□□□ 0.26
SUCO-208ENST00000609685 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
SUCO-208ENST00000609685 OTUD5Q96G74 571 aa16.51■□□□□ 0.23
SUCO-208ENST00000609685 POTEMA6NI47 508 aa16.48■□□□□ 0.23
SUCO-208ENST00000609685 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
SUCO-208ENST00000609685 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
SUCO-208ENST00000609685 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
SUCO-208ENST00000609685 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
SUCO-208ENST00000609685 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
SUCO-208ENST00000609685 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
SUCO-208ENST00000609685 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
SUCO-208ENST00000609685 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
SUCO-208ENST00000609685 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
SUCO-208ENST00000609685 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
SUCO-208ENST00000609685 METRNQ9UJH8 293 aa16.04■□□□□ 0.16
SUCO-208ENST00000609685 MAMSTRQ6ZN01 415 aa16.01■□□□□ 0.15
SUCO-208ENST00000609685 POTEJP0CG39 1038 aa15.99■□□□□ 0.15
SUCO-208ENST00000609685 C7P10643 843 aa15.98■□□□□ 0.15
SUCO-208ENST00000609685 SLC39A7Q92504 469 aa15.98■□□□□ 0.15
SUCO-208ENST00000609685 ASTLQ6HA08 431 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms