RNA–Protein interactions for RNA: ENST00000606189.1

LINC02060-202, Transcript of long intergenic non-protein coding RNA 2060, humanhuman

TSL 5

Gene LINC02060, Length 421 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02060-202ENST00000606189 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
LINC02060-202ENST00000606189 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
LINC02060-202ENST00000606189 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
LINC02060-202ENST00000606189 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
LINC02060-202ENST00000606189 FOXD1Q16676 465 aa18.67■□□□□ 0.58
LINC02060-202ENST00000606189 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
LINC02060-202ENST00000606189 MSH5O43196 834 aa17.59■□□□□ 0.41
LINC02060-202ENST00000606189 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
LINC02060-202ENST00000606189 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
LINC02060-202ENST00000606189 ADRA2BP18089 450 aa17■□□□□ 0.31
LINC02060-202ENST00000606189 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
LINC02060-202ENST00000606189 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
LINC02060-202ENST00000606189 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
LINC02060-202ENST00000606189 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
LINC02060-202ENST00000606189 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
LINC02060-202ENST00000606189 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
LINC02060-202ENST00000606189 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
LINC02060-202ENST00000606189 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
LINC02060-202ENST00000606189 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
LINC02060-202ENST00000606189 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
LINC02060-202ENST00000606189 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
LINC02060-202ENST00000606189 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
LINC02060-202ENST00000606189 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
LINC02060-202ENST00000606189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC02060-202ENST00000606189 POTEHQ6S545 545 aa14.13□□□□□ -0.15
LINC02060-202ENST00000606189 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
LINC02060-202ENST00000606189 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
LINC02060-202ENST00000606189 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
LINC02060-202ENST00000606189 CAPN15O75808 1086 aa13.88□□□□□ -0.19
LINC02060-202ENST00000606189 DSG3P32926 999 aa13.88□□□□□ -0.19
LINC02060-202ENST00000606189 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
LINC02060-202ENST00000606189 ABCB7O75027 752 aa13.55□□□□□ -0.24
LINC02060-202ENST00000606189 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
LINC02060-202ENST00000606189 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
LINC02060-202ENST00000606189 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
LINC02060-202ENST00000606189 APLP2Q06481 763 aa13.31□□□□□ -0.28
LINC02060-202ENST00000606189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
LINC02060-202ENST00000606189 KCNA4P22459 653 aa13.19□□□□□ -0.3
LINC02060-202ENST00000606189 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
LINC02060-202ENST00000606189 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
LINC02060-202ENST00000606189 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
LINC02060-202ENST00000606189 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
LINC02060-202ENST00000606189 POLA2Q14181 598 aa13.03□□□□□ -0.32
LINC02060-202ENST00000606189 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
LINC02060-202ENST00000606189 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
LINC02060-202ENST00000606189 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
LINC02060-202ENST00000606189 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
LINC02060-202ENST00000606189 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
LINC02060-202ENST00000606189 HAX1O00165 279 aa12.72□□□□□ -0.37
LINC02060-202ENST00000606189 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
LINC02060-202ENST00000606189 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
LINC02060-202ENST00000606189 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
LINC02060-202ENST00000606189 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
LINC02060-202ENST00000606189 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC02060-202ENST00000606189 EVX2Q03828 476 aa12.56□□□□□ -0.4
LINC02060-202ENST00000606189 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
LINC02060-202ENST00000606189 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
LINC02060-202ENST00000606189 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
LINC02060-202ENST00000606189 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
LINC02060-202ENST00000606189 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
LINC02060-202ENST00000606189 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
LINC02060-202ENST00000606189 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
LINC02060-202ENST00000606189 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
LINC02060-202ENST00000606189 GABBR2O75899 941 aa12.19□□□□□ -0.46
LINC02060-202ENST00000606189 LHX8Q68G74 356 aa12.19□□□□□ -0.46
LINC02060-202ENST00000606189 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
LINC02060-202ENST00000606189 ZBTB22O15209 634 aa12.12□□□□□ -0.47
LINC02060-202ENST00000606189 FBLN2P98095 1184 aa12.12□□□□□ -0.47
LINC02060-202ENST00000606189 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
LINC02060-202ENST00000606189 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
LINC02060-202ENST00000606189 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
LINC02060-202ENST00000606189 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
LINC02060-202ENST00000606189 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
LINC02060-202ENST00000606189 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
LINC02060-202ENST00000606189 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
LINC02060-202ENST00000606189 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
LINC02060-202ENST00000606189 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
LINC02060-202ENST00000606189 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC02060-202ENST00000606189 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
LINC02060-202ENST00000606189 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
LINC02060-202ENST00000606189 CLCN6P51797 869 aa11.64□□□□□ -0.55
LINC02060-202ENST00000606189 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
LINC02060-202ENST00000606189 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
LINC02060-202ENST00000606189 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
LINC02060-202ENST00000606189 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
LINC02060-202ENST00000606189 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
LINC02060-202ENST00000606189 POTEMA6NI47 508 aa11.52□□□□□ -0.57
LINC02060-202ENST00000606189 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
LINC02060-202ENST00000606189 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
LINC02060-202ENST00000606189 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
LINC02060-202ENST00000606189 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
LINC02060-202ENST00000606189 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
LINC02060-202ENST00000606189 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
LINC02060-202ENST00000606189 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
LINC02060-202ENST00000606189 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
LINC02060-202ENST00000606189 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
LINC02060-202ENST00000606189 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
LINC02060-202ENST00000606189 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
LINC02060-202ENST00000606189 ASTLQ6HA08 431 aaPredicted RBP11.22□□□□□ -0.61
LINC02060-202ENST00000606189 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms