RNA–Protein interactions for RNA: ENST00000605370.1

SH3YL1-228, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 870 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-228ENST00000605370 AEBP2Q6ZN18 517 aaPredicted RBP33.88■■■■□ 3.01
SH3YL1-228ENST00000605370 CHIC1Q5VXU3 224 aa33.12■■■□□ 2.89
SH3YL1-228ENST00000605370 PHF23Q9BUL5 403 aaPredicted RBP29.08■■■□□ 2.25
SH3YL1-228ENST00000605370 SENP3Q9H4L4 574 aaPredicted RBP28.85■■■□□ 2.21
SH3YL1-228ENST00000605370 PLPPR3Q6T4P5 718 aa26.92■■□□□ 1.9
SH3YL1-228ENST00000605370 FOXD1Q16676 465 aa26.72■■□□□ 1.87
SH3YL1-228ENST00000605370 PPP6R1Q9UPN7 881 aa25.67■■□□□ 1.7
SH3YL1-228ENST00000605370 ADRA2BP18089 450 aa25.66■■□□□ 1.7
SH3YL1-228ENST00000605370 PIAS4Q8N2W9 510 aaPredicted RBP25.22■■□□□ 1.63
SH3YL1-228ENST00000605370 MSH5O43196 834 aa24.72■■□□□ 1.55
SH3YL1-228ENST00000605370 PPP4R3CPQ6ZMV5 832 aa23.7■■□□□ 1.38
SH3YL1-228ENST00000605370 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
SH3YL1-228ENST00000605370 MAPK8IP2Q13387 824 aaPredicted RBP23.28■■□□□ 1.32
SH3YL1-228ENST00000605370 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
SH3YL1-228ENST00000605370 KCNA4P22459 653 aa23.08■■□□□ 1.29
SH3YL1-228ENST00000605370 CNKSR2Q8WXI2 1034 aa23.06■■□□□ 1.28
SH3YL1-228ENST00000605370 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
SH3YL1-228ENST00000605370 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
SH3YL1-228ENST00000605370 RNF216Q9NWF9 866 aaPredicted RBP22.61■■□□□ 1.21
SH3YL1-228ENST00000605370 HOXD11P31277 338 aaPredicted RBP22.51■■□□□ 1.19
SH3YL1-228ENST00000605370 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
SH3YL1-228ENST00000605370 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
SH3YL1-228ENST00000605370 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
SH3YL1-228ENST00000605370 SLC4A1APQ9BWU0 796 aaKnown RBP22.01■■□□□ 1.11
SH3YL1-228ENST00000605370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
SH3YL1-228ENST00000605370 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
SH3YL1-228ENST00000605370 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
SH3YL1-228ENST00000605370 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
SH3YL1-228ENST00000605370 ZBTB22O15209 634 aa21.19■□□□□ 0.98
SH3YL1-228ENST00000605370 RNF39Q9H2S5 420 aa21.13■□□□□ 0.97
SH3YL1-228ENST00000605370 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
SH3YL1-228ENST00000605370 U3KPZ7 1027 aaPredicted RBP21.08■□□□□ 0.97
SH3YL1-228ENST00000605370 MYCNP04198 464 aaPredicted RBP21.02■□□□□ 0.96
SH3YL1-228ENST00000605370 C1QBPQ07021 282 aaKnown RBP20.93■□□□□ 0.94
SH3YL1-228ENST00000605370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
SH3YL1-228ENST00000605370 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
SH3YL1-228ENST00000605370 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
SH3YL1-228ENST00000605370 APLP2Q06481 763 aa20.71■□□□□ 0.91
SH3YL1-228ENST00000605370 CACNB1Q02641 598 aaPredicted RBP20.65■□□□□ 0.9
SH3YL1-228ENST00000605370 ATXN8OSP0DMR3 200 aa20.57■□□□□ 0.88
SH3YL1-228ENST00000605370 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
SH3YL1-228ENST00000605370 CAPN15O75808 1086 aa20.47■□□□□ 0.87
SH3YL1-228ENST00000605370 ATF5Q9Y2D1 282 aaPredicted RBP20.39■□□□□ 0.85
SH3YL1-228ENST00000605370 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
SH3YL1-228ENST00000605370 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
SH3YL1-228ENST00000605370 DSG3P32926 999 aa20.1■□□□□ 0.81
SH3YL1-228ENST00000605370 ABCB7O75027 752 aa20.04■□□□□ 0.8
SH3YL1-228ENST00000605370 POLA2Q14181 598 aa20.02■□□□□ 0.8
SH3YL1-228ENST00000605370 ZBTB12Q9Y330 459 aaPredicted RBP19.74■□□□□ 0.75
SH3YL1-228ENST00000605370 FBLN2P98095 1184 aa19.64■□□□□ 0.73
SH3YL1-228ENST00000605370 MKRN4PQ13434 485 aaPredicted RBP19.51■□□□□ 0.71
SH3YL1-228ENST00000605370 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
SH3YL1-228ENST00000605370 RBM42Q9BTD8 480 aaKnown RBP19.23■□□□□ 0.67
SH3YL1-228ENST00000605370 SPDYE2BA6NHP3 402 aa19.17■□□□□ 0.66
SH3YL1-228ENST00000605370 SPDYE6P0CI01 402 aa19.17■□□□□ 0.66
SH3YL1-228ENST00000605370 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
SH3YL1-228ENST00000605370 SPDYE4A6NLX3 237 aa19.12■□□□□ 0.65
SH3YL1-228ENST00000605370 FKBP8Q14318 412 aa19.1■□□□□ 0.65
SH3YL1-228ENST00000605370 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
SH3YL1-228ENST00000605370 SSUH2Q9Y2M2 353 aa18.99■□□□□ 0.63
SH3YL1-228ENST00000605370 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
SH3YL1-228ENST00000605370 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
SH3YL1-228ENST00000605370 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
SH3YL1-228ENST00000605370 PROM2Q8N271 834 aa18.75■□□□□ 0.59
SH3YL1-228ENST00000605370 SPDYE1Q8NFV5 336 aaPredicted RBP18.63■□□□□ 0.57
SH3YL1-228ENST00000605370 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
SH3YL1-228ENST00000605370 CLEC11AQ9Y240 323 aa18.53■□□□□ 0.56
SH3YL1-228ENST00000605370 PITPNM1O00562 1244 aa18.52■□□□□ 0.56
SH3YL1-228ENST00000605370 FBXO3Q9UK99 471 aa18.49■□□□□ 0.55
SH3YL1-228ENST00000605370 CHRDL2Q6WN34 429 aa18.39■□□□□ 0.53
SH3YL1-228ENST00000605370 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
SH3YL1-228ENST00000605370 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.5
SH3YL1-228ENST00000605370 VASPP50552 380 aaPredicted RBP18.17■□□□□ 0.5
SH3YL1-228ENST00000605370 MIER1Q8N108 512 aa18.16■□□□□ 0.5
SH3YL1-228ENST00000605370 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
SH3YL1-228ENST00000605370 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
SH3YL1-228ENST00000605370 PIP4P2Q8N4L2 257 aa18.13■□□□□ 0.49
SH3YL1-228ENST00000605370 PRKAR2AP13861 404 aaKnown RBP18.08■□□□□ 0.48
SH3YL1-228ENST00000605370 CREBZFQ9NS37 354 aa18.08■□□□□ 0.48
SH3YL1-228ENST00000605370 CHADLQ6NUI6 762 aa18.04■□□□□ 0.48
SH3YL1-228ENST00000605370 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
SH3YL1-228ENST00000605370 KLHL34Q8N239 644 aa17.93■□□□□ 0.46
SH3YL1-228ENST00000605370 IFNLR1Q8IU57 520 aaPredicted RBP17.91■□□□□ 0.46
SH3YL1-228ENST00000605370 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
SH3YL1-228ENST00000605370 MNX1P50219 401 aaPredicted RBP17.87■□□□□ 0.45
SH3YL1-228ENST00000605370 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
SH3YL1-228ENST00000605370 POTEHQ6S545 545 aa17.84■□□□□ 0.45
SH3YL1-228ENST00000605370 SPOCK2Q92563 424 aa17.76■□□□□ 0.43
SH3YL1-228ENST00000605370 NUBP1P53384 320 aa17.65■□□□□ 0.42
SH3YL1-228ENST00000605370 HAX1O00165 279 aa17.6■□□□□ 0.41
SH3YL1-228ENST00000605370 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
SH3YL1-228ENST00000605370 C19orf67A6NJJ6 358 aa17.57■□□□□ 0.4
SH3YL1-228ENST00000605370 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
SH3YL1-228ENST00000605370 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
SH3YL1-228ENST00000605370 FAM212AQ96EL1 285 aa17.56■□□□□ 0.4
SH3YL1-228ENST00000605370 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
SH3YL1-228ENST00000605370 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.4
SH3YL1-228ENST00000605370 GSE1Q14687 1217 aa17.51■□□□□ 0.39
SH3YL1-228ENST00000605370 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
SH3YL1-228ENST00000605370 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms