RNA–Protein interactions for RNA: ENST00000600624.5

LINC01378-203, Transcript of long intergenic non-protein coding RNA 1378, humanhuman

TSL 5

Gene LINC01378, Length 698 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01378-203ENST00000600624 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
LINC01378-203ENST00000600624 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
LINC01378-203ENST00000600624 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
LINC01378-203ENST00000600624 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
LINC01378-203ENST00000600624 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
LINC01378-203ENST00000600624 FOXD1Q16676 465 aa22.54■■□□□ 1.2
LINC01378-203ENST00000600624 ADRA2BP18089 450 aa21.69■■□□□ 1.06
LINC01378-203ENST00000600624 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
LINC01378-203ENST00000600624 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
LINC01378-203ENST00000600624 MSH5O43196 834 aa20.89■□□□□ 0.93
LINC01378-203ENST00000600624 PPP4R3CPQ6ZMV5 832 aa20.1■□□□□ 0.81
LINC01378-203ENST00000600624 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
LINC01378-203ENST00000600624 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
LINC01378-203ENST00000600624 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
LINC01378-203ENST00000600624 KCNA4P22459 653 aa19.63■□□□□ 0.73
LINC01378-203ENST00000600624 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
LINC01378-203ENST00000600624 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
LINC01378-203ENST00000600624 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
LINC01378-203ENST00000600624 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
LINC01378-203ENST00000600624 RNF216Q9NWF9 866 aaPredicted RBP19.18■□□□□ 0.66
LINC01378-203ENST00000600624 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
LINC01378-203ENST00000600624 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
LINC01378-203ENST00000600624 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
LINC01378-203ENST00000600624 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
LINC01378-203ENST00000600624 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
LINC01378-203ENST00000600624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC01378-203ENST00000600624 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
LINC01378-203ENST00000600624 FOXD4L1Q9NU39 408 aa18.13■□□□□ 0.49
LINC01378-203ENST00000600624 ZBTB22O15209 634 aa18■□□□□ 0.47
LINC01378-203ENST00000600624 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
LINC01378-203ENST00000600624 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
LINC01378-203ENST00000600624 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
LINC01378-203ENST00000600624 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
LINC01378-203ENST00000600624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
LINC01378-203ENST00000600624 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
LINC01378-203ENST00000600624 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
LINC01378-203ENST00000600624 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
LINC01378-203ENST00000600624 APLP2Q06481 763 aa17.63■□□□□ 0.41
LINC01378-203ENST00000600624 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
LINC01378-203ENST00000600624 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
LINC01378-203ENST00000600624 CAPN15O75808 1086 aa17.32■□□□□ 0.36
LINC01378-203ENST00000600624 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
LINC01378-203ENST00000600624 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
LINC01378-203ENST00000600624 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
LINC01378-203ENST00000600624 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
LINC01378-203ENST00000600624 DSG3P32926 999 aa16.98■□□□□ 0.31
LINC01378-203ENST00000600624 POLA2Q14181 598 aa16.95■□□□□ 0.3
LINC01378-203ENST00000600624 ABCB7O75027 752 aa16.93■□□□□ 0.3
LINC01378-203ENST00000600624 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
LINC01378-203ENST00000600624 FBLN2P98095 1184 aa16.71■□□□□ 0.27
LINC01378-203ENST00000600624 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
LINC01378-203ENST00000600624 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
LINC01378-203ENST00000600624 FKBP8Q14318 412 aa16.31■□□□□ 0.2
LINC01378-203ENST00000600624 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
LINC01378-203ENST00000600624 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
LINC01378-203ENST00000600624 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
LINC01378-203ENST00000600624 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
LINC01378-203ENST00000600624 SPDYE4A6NLX3 237 aa16.28■□□□□ 0.2
LINC01378-203ENST00000600624 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
LINC01378-203ENST00000600624 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
LINC01378-203ENST00000600624 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
LINC01378-203ENST00000600624 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
LINC01378-203ENST00000600624 PROM2Q8N271 834 aa15.97■□□□□ 0.15
LINC01378-203ENST00000600624 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
LINC01378-203ENST00000600624 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
LINC01378-203ENST00000600624 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
LINC01378-203ENST00000600624 SPDYE1Q8NFV5 336 aaPredicted RBP15.81■□□□□ 0.12
LINC01378-203ENST00000600624 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
LINC01378-203ENST00000600624 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
LINC01378-203ENST00000600624 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
LINC01378-203ENST00000600624 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
LINC01378-203ENST00000600624 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
LINC01378-203ENST00000600624 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
LINC01378-203ENST00000600624 MIER1Q8N108 512 aa15.46■□□□□ 0.07
LINC01378-203ENST00000600624 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
LINC01378-203ENST00000600624 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC01378-203ENST00000600624 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
LINC01378-203ENST00000600624 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
LINC01378-203ENST00000600624 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
LINC01378-203ENST00000600624 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
LINC01378-203ENST00000600624 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
LINC01378-203ENST00000600624 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
LINC01378-203ENST00000600624 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
LINC01378-203ENST00000600624 NPM1P06748 294 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC01378-203ENST00000600624 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
LINC01378-203ENST00000600624 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
LINC01378-203ENST00000600624 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
LINC01378-203ENST00000600624 POTEHQ6S545 545 aa15.08■□□□□ 0
LINC01378-203ENST00000600624 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
LINC01378-203ENST00000600624 NUBP1P53384 320 aa14.99□□□□□ -0.01
LINC01378-203ENST00000600624 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
LINC01378-203ENST00000600624 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
LINC01378-203ENST00000600624 GSE1Q14687 1217 aa14.94□□□□□ -0.02
LINC01378-203ENST00000600624 DCAF8Q5TAQ9 597 aa14.91□□□□□ -0.02
LINC01378-203ENST00000600624 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
LINC01378-203ENST00000600624 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
LINC01378-203ENST00000600624 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
LINC01378-203ENST00000600624 HAX1O00165 279 aa14.85□□□□□ -0.03
LINC01378-203ENST00000600624 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
LINC01378-203ENST00000600624 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms