RNA–Protein interactions for RNA: ENST00000592519.1

LAMA3-214, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-214ENST00000592519 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
LAMA3-214ENST00000592519 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
LAMA3-214ENST00000592519 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
LAMA3-214ENST00000592519 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
LAMA3-214ENST00000592519 FOXD1Q16676 465 aa18.39■□□□□ 0.53
LAMA3-214ENST00000592519 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
LAMA3-214ENST00000592519 MSH5O43196 834 aa17.25■□□□□ 0.35
LAMA3-214ENST00000592519 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
LAMA3-214ENST00000592519 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
LAMA3-214ENST00000592519 ADRA2BP18089 450 aa16.76■□□□□ 0.27
LAMA3-214ENST00000592519 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
LAMA3-214ENST00000592519 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.08
LAMA3-214ENST00000592519 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
LAMA3-214ENST00000592519 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
LAMA3-214ENST00000592519 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
LAMA3-214ENST00000592519 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
LAMA3-214ENST00000592519 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
LAMA3-214ENST00000592519 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
LAMA3-214ENST00000592519 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
LAMA3-214ENST00000592519 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
LAMA3-214ENST00000592519 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
LAMA3-214ENST00000592519 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
LAMA3-214ENST00000592519 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
LAMA3-214ENST00000592519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
LAMA3-214ENST00000592519 POTEHQ6S545 545 aa13.81□□□□□ -0.2
LAMA3-214ENST00000592519 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
LAMA3-214ENST00000592519 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
LAMA3-214ENST00000592519 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
LAMA3-214ENST00000592519 DSG3P32926 999 aa13.68□□□□□ -0.22
LAMA3-214ENST00000592519 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
LAMA3-214ENST00000592519 CAPN15O75808 1086 aa13.57□□□□□ -0.24
LAMA3-214ENST00000592519 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
LAMA3-214ENST00000592519 ABCB7O75027 752 aa13.28□□□□□ -0.28
LAMA3-214ENST00000592519 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
LAMA3-214ENST00000592519 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
LAMA3-214ENST00000592519 KCNA4P22459 653 aa13.09□□□□□ -0.31
LAMA3-214ENST00000592519 APLP2Q06481 763 aa13.03□□□□□ -0.32
LAMA3-214ENST00000592519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
LAMA3-214ENST00000592519 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
LAMA3-214ENST00000592519 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
LAMA3-214ENST00000592519 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
LAMA3-214ENST00000592519 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
LAMA3-214ENST00000592519 POLA2Q14181 598 aa12.8□□□□□ -0.36
LAMA3-214ENST00000592519 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-214ENST00000592519 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
LAMA3-214ENST00000592519 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
LAMA3-214ENST00000592519 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
LAMA3-214ENST00000592519 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
LAMA3-214ENST00000592519 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
LAMA3-214ENST00000592519 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
LAMA3-214ENST00000592519 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
LAMA3-214ENST00000592519 HAX1O00165 279 aa12.4□□□□□ -0.42
LAMA3-214ENST00000592519 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
LAMA3-214ENST00000592519 EVX2Q03828 476 aa12.37□□□□□ -0.43
LAMA3-214ENST00000592519 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
LAMA3-214ENST00000592519 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
LAMA3-214ENST00000592519 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
LAMA3-214ENST00000592519 ZBTB22O15209 634 aa12.09□□□□□ -0.47
LAMA3-214ENST00000592519 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
LAMA3-214ENST00000592519 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
LAMA3-214ENST00000592519 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
LAMA3-214ENST00000592519 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
LAMA3-214ENST00000592519 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
LAMA3-214ENST00000592519 GABBR2O75899 941 aa11.96□□□□□ -0.49
LAMA3-214ENST00000592519 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
LAMA3-214ENST00000592519 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-214ENST00000592519 LHX8Q68G74 356 aa11.91□□□□□ -0.5
LAMA3-214ENST00000592519 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
LAMA3-214ENST00000592519 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
LAMA3-214ENST00000592519 FBLN2P98095 1184 aa11.89□□□□□ -0.51
LAMA3-214ENST00000592519 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
LAMA3-214ENST00000592519 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
LAMA3-214ENST00000592519 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
LAMA3-214ENST00000592519 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
LAMA3-214ENST00000592519 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
LAMA3-214ENST00000592519 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
LAMA3-214ENST00000592519 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
LAMA3-214ENST00000592519 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-214ENST00000592519 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
LAMA3-214ENST00000592519 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
LAMA3-214ENST00000592519 CLCN6P51797 869 aa11.42□□□□□ -0.58
LAMA3-214ENST00000592519 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
LAMA3-214ENST00000592519 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
LAMA3-214ENST00000592519 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
LAMA3-214ENST00000592519 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
LAMA3-214ENST00000592519 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
LAMA3-214ENST00000592519 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
LAMA3-214ENST00000592519 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
LAMA3-214ENST00000592519 POTEMA6NI47 508 aa11.25□□□□□ -0.61
LAMA3-214ENST00000592519 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
LAMA3-214ENST00000592519 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
LAMA3-214ENST00000592519 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
LAMA3-214ENST00000592519 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
LAMA3-214ENST00000592519 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
LAMA3-214ENST00000592519 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
LAMA3-214ENST00000592519 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-214ENST00000592519 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
LAMA3-214ENST00000592519 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
LAMA3-214ENST00000592519 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
LAMA3-214ENST00000592519 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms