RNA–Protein interactions for RNA: ENST00000589213.1

ATP6V0A1-221, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 4

Gene ATP6V0A1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-221ENST00000589213 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
ATP6V0A1-221ENST00000589213 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
ATP6V0A1-221ENST00000589213 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
ATP6V0A1-221ENST00000589213 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
ATP6V0A1-221ENST00000589213 FOXD1Q16676 465 aa19.98■□□□□ 0.79
ATP6V0A1-221ENST00000589213 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
ATP6V0A1-221ENST00000589213 ADRA2BP18089 450 aa19.09■□□□□ 0.65
ATP6V0A1-221ENST00000589213 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
ATP6V0A1-221ENST00000589213 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
ATP6V0A1-221ENST00000589213 MSH5O43196 834 aa18.54■□□□□ 0.56
ATP6V0A1-221ENST00000589213 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
ATP6V0A1-221ENST00000589213 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
ATP6V0A1-221ENST00000589213 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
ATP6V0A1-221ENST00000589213 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
ATP6V0A1-221ENST00000589213 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
ATP6V0A1-221ENST00000589213 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
ATP6V0A1-221ENST00000589213 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
ATP6V0A1-221ENST00000589213 KCNA4P22459 653 aa16.83■□□□□ 0.28
ATP6V0A1-221ENST00000589213 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
ATP6V0A1-221ENST00000589213 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
ATP6V0A1-221ENST00000589213 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
ATP6V0A1-221ENST00000589213 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
ATP6V0A1-221ENST00000589213 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
ATP6V0A1-221ENST00000589213 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
ATP6V0A1-221ENST00000589213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.164e-7■■■■□ 24.9
ATP6V0A1-221ENST00000589213 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
ATP6V0A1-221ENST00000589213 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
ATP6V0A1-221ENST00000589213 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
ATP6V0A1-221ENST00000589213 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
ATP6V0A1-221ENST00000589213 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
ATP6V0A1-221ENST00000589213 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
ATP6V0A1-221ENST00000589213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
ATP6V0A1-221ENST00000589213 MYCNP04198 464 aaPredicted RBP15.44■□□□□ 0.06
ATP6V0A1-221ENST00000589213 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
ATP6V0A1-221ENST00000589213 ZBTB22O15209 634 aa15.43■□□□□ 0.06
ATP6V0A1-221ENST00000589213 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
ATP6V0A1-221ENST00000589213 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
ATP6V0A1-221ENST00000589213 APLP2Q06481 763 aa15.34■□□□□ 0.05
ATP6V0A1-221ENST00000589213 CAPN15O75808 1086 aa15.32■□□□□ 0.04
ATP6V0A1-221ENST00000589213 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
ATP6V0A1-221ENST00000589213 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
ATP6V0A1-221ENST00000589213 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
ATP6V0A1-221ENST00000589213 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
ATP6V0A1-221ENST00000589213 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
ATP6V0A1-221ENST00000589213 DSG3P32926 999 aa15.01□□□□□ -0.01
ATP6V0A1-221ENST00000589213 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
ATP6V0A1-221ENST00000589213 ABCB7O75027 752 aa14.98□□□□□ -0.01
ATP6V0A1-221ENST00000589213 POLA2Q14181 598 aa14.87□□□□□ -0.03
ATP6V0A1-221ENST00000589213 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
ATP6V0A1-221ENST00000589213 FBLN2P98095 1184 aa14.49□□□□□ -0.09
ATP6V0A1-221ENST00000589213 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
ATP6V0A1-221ENST00000589213 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
ATP6V0A1-221ENST00000589213 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
ATP6V0A1-221ENST00000589213 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
ATP6V0A1-221ENST00000589213 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
ATP6V0A1-221ENST00000589213 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
ATP6V0A1-221ENST00000589213 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
ATP6V0A1-221ENST00000589213 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
ATP6V0A1-221ENST00000589213 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
ATP6V0A1-221ENST00000589213 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
ATP6V0A1-221ENST00000589213 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
ATP6V0A1-221ENST00000589213 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATP6V0A1-221ENST00000589213 FKBP8Q14318 412 aa13.85□□□□□ -0.19
ATP6V0A1-221ENST00000589213 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
ATP6V0A1-221ENST00000589213 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
ATP6V0A1-221ENST00000589213 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
ATP6V0A1-221ENST00000589213 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
ATP6V0A1-221ENST00000589213 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
ATP6V0A1-221ENST00000589213 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
ATP6V0A1-221ENST00000589213 POTEHQ6S545 545 aa13.62□□□□□ -0.23
ATP6V0A1-221ENST00000589213 PROM2Q8N271 834 aa13.6□□□□□ -0.23
ATP6V0A1-221ENST00000589213 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
ATP6V0A1-221ENST00000589213 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
ATP6V0A1-221ENST00000589213 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
ATP6V0A1-221ENST00000589213 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
ATP6V0A1-221ENST00000589213 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
ATP6V0A1-221ENST00000589213 MIER1Q8N108 512 aa13.36□□□□□ -0.27
ATP6V0A1-221ENST00000589213 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
ATP6V0A1-221ENST00000589213 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
ATP6V0A1-221ENST00000589213 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
ATP6V0A1-221ENST00000589213 HAX1O00165 279 aa13.3□□□□□ -0.28
ATP6V0A1-221ENST00000589213 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
ATP6V0A1-221ENST00000589213 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATP6V0A1-221ENST00000589213 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
ATP6V0A1-221ENST00000589213 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
ATP6V0A1-221ENST00000589213 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
ATP6V0A1-221ENST00000589213 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
ATP6V0A1-221ENST00000589213 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
ATP6V0A1-221ENST00000589213 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
ATP6V0A1-221ENST00000589213 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
ATP6V0A1-221ENST00000589213 EVX2Q03828 476 aa13.06□□□□□ -0.32
ATP6V0A1-221ENST00000589213 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
ATP6V0A1-221ENST00000589213 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
ATP6V0A1-221ENST00000589213 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
ATP6V0A1-221ENST00000589213 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
ATP6V0A1-221ENST00000589213 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
ATP6V0A1-221ENST00000589213 NUBP1P53384 320 aa12.92□□□□□ -0.34
ATP6V0A1-221ENST00000589213 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
ATP6V0A1-221ENST00000589213 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
ATP6V0A1-221ENST00000589213 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms