RNA–Protein interactions for RNA: ENST00000577766.5

CCDC178-207, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC178, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-207ENST00000577766 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
CCDC178-207ENST00000577766 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
CCDC178-207ENST00000577766 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
CCDC178-207ENST00000577766 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
CCDC178-207ENST00000577766 FOXD1Q16676 465 aa20.4■□□□□ 0.86
CCDC178-207ENST00000577766 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
CCDC178-207ENST00000577766 MSH5O43196 834 aa19.32■□□□□ 0.68
CCDC178-207ENST00000577766 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.6
CCDC178-207ENST00000577766 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
CCDC178-207ENST00000577766 ADRA2BP18089 450 aa18.34■□□□□ 0.53
CCDC178-207ENST00000577766 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
CCDC178-207ENST00000577766 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
CCDC178-207ENST00000577766 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
CCDC178-207ENST00000577766 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
CCDC178-207ENST00000577766 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
CCDC178-207ENST00000577766 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
CCDC178-207ENST00000577766 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
CCDC178-207ENST00000577766 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CCDC178-207ENST00000577766 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
CCDC178-207ENST00000577766 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
CCDC178-207ENST00000577766 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
CCDC178-207ENST00000577766 POTEHQ6S545 545 aa15.75■□□□□ 0.11
CCDC178-207ENST00000577766 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
CCDC178-207ENST00000577766 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
CCDC178-207ENST00000577766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC178-207ENST00000577766 DSG3P32926 999 aa15.15■□□□□ 0.02
CCDC178-207ENST00000577766 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
CCDC178-207ENST00000577766 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
CCDC178-207ENST00000577766 CAPN15O75808 1086 aa15□□□□□ -0.01
CCDC178-207ENST00000577766 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
CCDC178-207ENST00000577766 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
CCDC178-207ENST00000577766 ABCB7O75027 752 aa14.63□□□□□ -0.07
CCDC178-207ENST00000577766 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
CCDC178-207ENST00000577766 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
CCDC178-207ENST00000577766 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
CCDC178-207ENST00000577766 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
CCDC178-207ENST00000577766 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
CCDC178-207ENST00000577766 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
CCDC178-207ENST00000577766 APLP2Q06481 763 aa14.34□□□□□ -0.11
CCDC178-207ENST00000577766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
CCDC178-207ENST00000577766 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CCDC178-207ENST00000577766 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
CCDC178-207ENST00000577766 POLA2Q14181 598 aa13.99□□□□□ -0.17
CCDC178-207ENST00000577766 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
CCDC178-207ENST00000577766 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
CCDC178-207ENST00000577766 HAX1O00165 279 aa13.87□□□□□ -0.19
CCDC178-207ENST00000577766 KCNA4P22459 653 aa13.82□□□□□ -0.2
CCDC178-207ENST00000577766 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
CCDC178-207ENST00000577766 EVX2Q03828 476 aa13.76□□□□□ -0.21
CCDC178-207ENST00000577766 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC178-207ENST00000577766 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
CCDC178-207ENST00000577766 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
CCDC178-207ENST00000577766 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
CCDC178-207ENST00000577766 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
CCDC178-207ENST00000577766 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
CCDC178-207ENST00000577766 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CCDC178-207ENST00000577766 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
CCDC178-207ENST00000577766 GABBR2O75899 941 aa13.33□□□□□ -0.28
CCDC178-207ENST00000577766 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
CCDC178-207ENST00000577766 PLSCR2Q9NRY7 297 aa13.28□□□□□ -0.28
CCDC178-207ENST00000577766 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
CCDC178-207ENST00000577766 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
CCDC178-207ENST00000577766 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
CCDC178-207ENST00000577766 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
CCDC178-207ENST00000577766 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
CCDC178-207ENST00000577766 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
CCDC178-207ENST00000577766 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
CCDC178-207ENST00000577766 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
CCDC178-207ENST00000577766 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
CCDC178-207ENST00000577766 FBLN2P98095 1184 aa12.9□□□□□ -0.34
CCDC178-207ENST00000577766 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
CCDC178-207ENST00000577766 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
CCDC178-207ENST00000577766 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
CCDC178-207ENST00000577766 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
CCDC178-207ENST00000577766 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
CCDC178-207ENST00000577766 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
CCDC178-207ENST00000577766 ZBTB22O15209 634 aa12.74□□□□□ -0.37
CCDC178-207ENST00000577766 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
CCDC178-207ENST00000577766 POTEMA6NI47 508 aa12.73□□□□□ -0.37
CCDC178-207ENST00000577766 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
CCDC178-207ENST00000577766 CLCN6P51797 869 aa12.71□□□□□ -0.37
CCDC178-207ENST00000577766 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
CCDC178-207ENST00000577766 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
CCDC178-207ENST00000577766 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
CCDC178-207ENST00000577766 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC178-207ENST00000577766 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CCDC178-207ENST00000577766 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CCDC178-207ENST00000577766 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
CCDC178-207ENST00000577766 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
CCDC178-207ENST00000577766 LCE2DQ5TA82 110 aaPredicted RBP12.41□□□□□ -0.42
CCDC178-207ENST00000577766 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
CCDC178-207ENST00000577766 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
CCDC178-207ENST00000577766 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
CCDC178-207ENST00000577766 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
CCDC178-207ENST00000577766 METRNQ9UJH8 293 aa12.26□□□□□ -0.45
CCDC178-207ENST00000577766 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
CCDC178-207ENST00000577766 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
CCDC178-207ENST00000577766 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
CCDC178-207ENST00000577766 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
CCDC178-207ENST00000577766 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms