RNA–Protein interactions for RNA: ENST00000571158.5

BCAR4-201, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 5

Gene BCAR4, Length 791 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-201ENST00000571158 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
BCAR4-201ENST00000571158 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
BCAR4-201ENST00000571158 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
BCAR4-201ENST00000571158 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
BCAR4-201ENST00000571158 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
BCAR4-201ENST00000571158 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
BCAR4-201ENST00000571158 KCNA4P22459 653 aa13.66□□□□□ -0.22
BCAR4-201ENST00000571158 ADRA2BP18089 450 aa13.53□□□□□ -0.24
BCAR4-201ENST00000571158 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
BCAR4-201ENST00000571158 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
BCAR4-201ENST00000571158 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
BCAR4-201ENST00000571158 FOXD1Q16676 465 aa13.1□□□□□ -0.31
BCAR4-201ENST00000571158 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
BCAR4-201ENST00000571158 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
BCAR4-201ENST00000571158 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
BCAR4-201ENST00000571158 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
BCAR4-201ENST00000571158 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
BCAR4-201ENST00000571158 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
BCAR4-201ENST00000571158 ZBTB22O15209 634 aa12.5□□□□□ -0.41
BCAR4-201ENST00000571158 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
BCAR4-201ENST00000571158 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
BCAR4-201ENST00000571158 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
BCAR4-201ENST00000571158 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
BCAR4-201ENST00000571158 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
BCAR4-201ENST00000571158 FKBP8Q14318 412 aa12□□□□□ -0.49
BCAR4-201ENST00000571158 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
BCAR4-201ENST00000571158 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
BCAR4-201ENST00000571158 MSH5O43196 834 aa11.89□□□□□ -0.51
BCAR4-201ENST00000571158 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
BCAR4-201ENST00000571158 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
BCAR4-201ENST00000571158 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
BCAR4-201ENST00000571158 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
BCAR4-201ENST00000571158 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
BCAR4-201ENST00000571158 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
BCAR4-201ENST00000571158 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
BCAR4-201ENST00000571158 BCANQ96GW7 911 aa11.43□□□□□ -0.58
BCAR4-201ENST00000571158 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
BCAR4-201ENST00000571158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
BCAR4-201ENST00000571158 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
BCAR4-201ENST00000571158 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
BCAR4-201ENST00000571158 DCAF8L2P0C7V8 631 aa11.33□□□□□ -0.6
BCAR4-201ENST00000571158 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
BCAR4-201ENST00000571158 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
BCAR4-201ENST00000571158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
BCAR4-201ENST00000571158 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
BCAR4-201ENST00000571158 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
BCAR4-201ENST00000571158 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
BCAR4-201ENST00000571158 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
BCAR4-201ENST00000571158 DCAF8L1A6NGE4 600 aa11.12□□□□□ -0.63
BCAR4-201ENST00000571158 APLP2Q06481 763 aa11.11□□□□□ -0.63
BCAR4-201ENST00000571158 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
BCAR4-201ENST00000571158 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
BCAR4-201ENST00000571158 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
BCAR4-201ENST00000571158 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
BCAR4-201ENST00000571158 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
BCAR4-201ENST00000571158 PROM2Q8N271 834 aa10.99□□□□□ -0.65
BCAR4-201ENST00000571158 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
BCAR4-201ENST00000571158 FBLN2P98095 1184 aa10.96□□□□□ -0.65
BCAR4-201ENST00000571158 PKD2Q13563 968 aa10.96□□□□□ -0.65
BCAR4-201ENST00000571158 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
BCAR4-201ENST00000571158 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
BCAR4-201ENST00000571158 ECM2O94769 699 aaPredicted RBP10.87□□□□□ -0.67
BCAR4-201ENST00000571158 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
BCAR4-201ENST00000571158 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
BCAR4-201ENST00000571158 SPOCK2Q92563 424 aa10.83□□□□□ -0.68
BCAR4-201ENST00000571158 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
BCAR4-201ENST00000571158 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
BCAR4-201ENST00000571158 NBR1Q14596 966 aa10.79□□□□□ -0.68
BCAR4-201ENST00000571158 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
BCAR4-201ENST00000571158 NISCHQ9Y2I1 1504 aa10.74□□□□□ -0.69
BCAR4-201ENST00000571158 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
BCAR4-201ENST00000571158 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
BCAR4-201ENST00000571158 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
BCAR4-201ENST00000571158 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
BCAR4-201ENST00000571158 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
BCAR4-201ENST00000571158 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
BCAR4-201ENST00000571158 RGL2O15211 777 aa10.62□□□□□ -0.71
BCAR4-201ENST00000571158 ARXQ96QS3 562 aa10.62□□□□□ -0.71
BCAR4-201ENST00000571158 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
BCAR4-201ENST00000571158 POLA2Q14181 598 aa10.61□□□□□ -0.71
BCAR4-201ENST00000571158 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
BCAR4-201ENST00000571158 CHGAP10645 457 aaKnown RBP10.6□□□□□ -0.71
BCAR4-201ENST00000571158 GTF3C3Q9Y5Q9 886 aa10.59□□□□□ -0.71
BCAR4-201ENST00000571158 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
BCAR4-201ENST00000571158 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
BCAR4-201ENST00000571158 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
BCAR4-201ENST00000571158 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
BCAR4-201ENST00000571158 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
BCAR4-201ENST00000571158 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
BCAR4-201ENST00000571158 MIER1Q8N108 512 aa10.51□□□□□ -0.73
BCAR4-201ENST00000571158 CAPN15O75808 1086 aa10.47□□□□□ -0.73
BCAR4-201ENST00000571158 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
BCAR4-201ENST00000571158 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
BCAR4-201ENST00000571158 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
BCAR4-201ENST00000571158 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
BCAR4-201ENST00000571158 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
BCAR4-201ENST00000571158 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
BCAR4-201ENST00000571158 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
BCAR4-201ENST00000571158 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
BCAR4-201ENST00000571158 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms