RNA–Protein interactions for RNA: ENST00000568781.1

MYO9A-220, Transcript of myosin IXA, humanhuman

TSL 3

Gene MYO9A, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO9A-220ENST00000568781 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
MYO9A-220ENST00000568781 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
MYO9A-220ENST00000568781 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
MYO9A-220ENST00000568781 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
MYO9A-220ENST00000568781 FOXD1Q16676 465 aa17.83■□□□□ 0.44
MYO9A-220ENST00000568781 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
MYO9A-220ENST00000568781 MSH5O43196 834 aa16.89■□□□□ 0.29
MYO9A-220ENST00000568781 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
MYO9A-220ENST00000568781 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
MYO9A-220ENST00000568781 ADRA2BP18089 450 aa16.09■□□□□ 0.17
MYO9A-220ENST00000568781 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
MYO9A-220ENST00000568781 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
MYO9A-220ENST00000568781 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
MYO9A-220ENST00000568781 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
MYO9A-220ENST00000568781 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
MYO9A-220ENST00000568781 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
MYO9A-220ENST00000568781 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
MYO9A-220ENST00000568781 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
MYO9A-220ENST00000568781 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
MYO9A-220ENST00000568781 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
MYO9A-220ENST00000568781 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
MYO9A-220ENST00000568781 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
MYO9A-220ENST00000568781 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
MYO9A-220ENST00000568781 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
MYO9A-220ENST00000568781 POTEHQ6S545 545 aa13.67□□□□□ -0.22
MYO9A-220ENST00000568781 KCNA4P22459 653 aa13.64□□□□□ -0.23
MYO9A-220ENST00000568781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
MYO9A-220ENST00000568781 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
MYO9A-220ENST00000568781 DSG3P32926 999 aa13.26□□□□□ -0.29
MYO9A-220ENST00000568781 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
MYO9A-220ENST00000568781 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
MYO9A-220ENST00000568781 CAPN15O75808 1086 aa13.15□□□□□ -0.3
MYO9A-220ENST00000568781 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
MYO9A-220ENST00000568781 ABCB7O75027 752 aa12.81□□□□□ -0.36
MYO9A-220ENST00000568781 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
MYO9A-220ENST00000568781 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
MYO9A-220ENST00000568781 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
MYO9A-220ENST00000568781 APLP2Q06481 763 aa12.65□□□□□ -0.38
MYO9A-220ENST00000568781 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
MYO9A-220ENST00000568781 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
MYO9A-220ENST00000568781 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
MYO9A-220ENST00000568781 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
MYO9A-220ENST00000568781 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
MYO9A-220ENST00000568781 ZBTB22O15209 634 aa12.53□□□□□ -0.4
MYO9A-220ENST00000568781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
MYO9A-220ENST00000568781 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
MYO9A-220ENST00000568781 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
MYO9A-220ENST00000568781 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
MYO9A-220ENST00000568781 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
MYO9A-220ENST00000568781 POLA2Q14181 598 aa12.3□□□□□ -0.44
MYO9A-220ENST00000568781 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
MYO9A-220ENST00000568781 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
MYO9A-220ENST00000568781 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
MYO9A-220ENST00000568781 HAX1O00165 279 aa12.13□□□□□ -0.47
MYO9A-220ENST00000568781 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
MYO9A-220ENST00000568781 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
MYO9A-220ENST00000568781 PITPNM1O00562 1244 aa12□□□□□ -0.49
MYO9A-220ENST00000568781 EVX2Q03828 476 aa11.99□□□□□ -0.49
MYO9A-220ENST00000568781 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
MYO9A-220ENST00000568781 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
MYO9A-220ENST00000568781 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
MYO9A-220ENST00000568781 LHX8Q68G74 356 aa11.71□□□□□ -0.53
MYO9A-220ENST00000568781 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
MYO9A-220ENST00000568781 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
MYO9A-220ENST00000568781 GABBR2O75899 941 aa11.65□□□□□ -0.54
MYO9A-220ENST00000568781 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
MYO9A-220ENST00000568781 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
MYO9A-220ENST00000568781 FBLN2P98095 1184 aa11.57□□□□□ -0.56
MYO9A-220ENST00000568781 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
MYO9A-220ENST00000568781 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
MYO9A-220ENST00000568781 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
MYO9A-220ENST00000568781 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
MYO9A-220ENST00000568781 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
MYO9A-220ENST00000568781 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
MYO9A-220ENST00000568781 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
MYO9A-220ENST00000568781 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
MYO9A-220ENST00000568781 FKBP8Q14318 412 aa11.33□□□□□ -0.6
MYO9A-220ENST00000568781 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
MYO9A-220ENST00000568781 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
MYO9A-220ENST00000568781 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
MYO9A-220ENST00000568781 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
MYO9A-220ENST00000568781 CLCN6P51797 869 aa11.2□□□□□ -0.62
MYO9A-220ENST00000568781 PROM2Q8N271 834 aa11.19□□□□□ -0.62
MYO9A-220ENST00000568781 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
MYO9A-220ENST00000568781 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
MYO9A-220ENST00000568781 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
MYO9A-220ENST00000568781 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
MYO9A-220ENST00000568781 POTEMA6NI47 508 aa11.07□□□□□ -0.64
MYO9A-220ENST00000568781 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
MYO9A-220ENST00000568781 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
MYO9A-220ENST00000568781 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
MYO9A-220ENST00000568781 POTEGQ6S5H5 508 aa11.02□□□□□ -0.65
MYO9A-220ENST00000568781 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
MYO9A-220ENST00000568781 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
MYO9A-220ENST00000568781 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
MYO9A-220ENST00000568781 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
MYO9A-220ENST00000568781 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
MYO9A-220ENST00000568781 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
MYO9A-220ENST00000568781 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
MYO9A-220ENST00000568781 PHF12Q96QT6 1004 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms