RNA–Protein interactions for RNA: ENST00000562385.1

TNFRSF17-203, Transcript of TNF receptor superfamily member 17, humanhuman

TSL 1 (best)

Gene TNFRSF17, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-203ENST00000562385 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF17-203ENST00000562385 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
TNFRSF17-203ENST00000562385 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
TNFRSF17-203ENST00000562385 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF17-203ENST00000562385 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
TNFRSF17-203ENST00000562385 FOXD1Q16676 465 aa16.93■□□□□ 0.3
TNFRSF17-203ENST00000562385 MSH5O43196 834 aa16.04■□□□□ 0.16
TNFRSF17-203ENST00000562385 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF17-203ENST00000562385 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
TNFRSF17-203ENST00000562385 ADRA2BP18089 450 aa15.18■□□□□ 0.02
TNFRSF17-203ENST00000562385 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
TNFRSF17-203ENST00000562385 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
TNFRSF17-203ENST00000562385 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF17-203ENST00000562385 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF17-203ENST00000562385 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.21
TNFRSF17-203ENST00000562385 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
TNFRSF17-203ENST00000562385 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
TNFRSF17-203ENST00000562385 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF17-203ENST00000562385 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
TNFRSF17-203ENST00000562385 POTEHQ6S545 545 aa13.1□□□□□ -0.31
TNFRSF17-203ENST00000562385 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
TNFRSF17-203ENST00000562385 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF17-203ENST00000562385 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
TNFRSF17-203ENST00000562385 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
TNFRSF17-203ENST00000562385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
TNFRSF17-203ENST00000562385 DSG3P32926 999 aa12.56□□□□□ -0.4
TNFRSF17-203ENST00000562385 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF17-203ENST00000562385 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF17-203ENST00000562385 CAPN15O75808 1086 aa12.4□□□□□ -0.42
TNFRSF17-203ENST00000562385 KCNA4P22459 653 aa12.31□□□□□ -0.44
TNFRSF17-203ENST00000562385 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
TNFRSF17-203ENST00000562385 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
TNFRSF17-203ENST00000562385 ABCB7O75027 752 aa12.1□□□□□ -0.47
TNFRSF17-203ENST00000562385 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF17-203ENST00000562385 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
TNFRSF17-203ENST00000562385 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF17-203ENST00000562385 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF17-203ENST00000562385 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
TNFRSF17-203ENST00000562385 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
TNFRSF17-203ENST00000562385 APLP2Q06481 763 aa11.85□□□□□ -0.51
TNFRSF17-203ENST00000562385 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
TNFRSF17-203ENST00000562385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF17-203ENST00000562385 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
TNFRSF17-203ENST00000562385 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF17-203ENST00000562385 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
TNFRSF17-203ENST00000562385 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
TNFRSF17-203ENST00000562385 POLA2Q14181 598 aa11.58□□□□□ -0.56
TNFRSF17-203ENST00000562385 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
TNFRSF17-203ENST00000562385 HAX1O00165 279 aa11.5□□□□□ -0.57
TNFRSF17-203ENST00000562385 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF17-203ENST00000562385 EVX2Q03828 476 aa11.43□□□□□ -0.58
TNFRSF17-203ENST00000562385 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
TNFRSF17-203ENST00000562385 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
TNFRSF17-203ENST00000562385 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
TNFRSF17-203ENST00000562385 ZBTB22O15209 634 aa11.33□□□□□ -0.6
TNFRSF17-203ENST00000562385 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
TNFRSF17-203ENST00000562385 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF17-203ENST00000562385 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
TNFRSF17-203ENST00000562385 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF17-203ENST00000562385 LHX8Q68G74 356 aa11.18□□□□□ -0.62
TNFRSF17-203ENST00000562385 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF17-203ENST00000562385 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
TNFRSF17-203ENST00000562385 GABBR2O75899 941 aa11.07□□□□□ -0.64
TNFRSF17-203ENST00000562385 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
TNFRSF17-203ENST00000562385 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
TNFRSF17-203ENST00000562385 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
TNFRSF17-203ENST00000562385 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
TNFRSF17-203ENST00000562385 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
TNFRSF17-203ENST00000562385 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
TNFRSF17-203ENST00000562385 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
TNFRSF17-203ENST00000562385 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
TNFRSF17-203ENST00000562385 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF17-203ENST00000562385 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
TNFRSF17-203ENST00000562385 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
TNFRSF17-203ENST00000562385 FBLN2P98095 1184 aa10.64□□□□□ -0.71
TNFRSF17-203ENST00000562385 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
TNFRSF17-203ENST00000562385 MKRN4PQ13434 485 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF17-203ENST00000562385 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF17-203ENST00000562385 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
TNFRSF17-203ENST00000562385 POTEMA6NI47 508 aa10.57□□□□□ -0.72
TNFRSF17-203ENST00000562385 CLCN6P51797 869 aa10.56□□□□□ -0.72
TNFRSF17-203ENST00000562385 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
TNFRSF17-203ENST00000562385 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
TNFRSF17-203ENST00000562385 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF17-203ENST00000562385 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
TNFRSF17-203ENST00000562385 POTEGQ6S5H5 508 aa10.51□□□□□ -0.73
TNFRSF17-203ENST00000562385 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
TNFRSF17-203ENST00000562385 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
TNFRSF17-203ENST00000562385 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF17-203ENST00000562385 PCDH10Q9P2E7 1040 aa10.38□□□□□ -0.75
TNFRSF17-203ENST00000562385 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
TNFRSF17-203ENST00000562385 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF17-203ENST00000562385 FKBP8Q14318 412 aa10.3□□□□□ -0.76
TNFRSF17-203ENST00000562385 PELP1Q8IZL8 1130 aaKnown RBP10.29□□□□□ -0.76
TNFRSF17-203ENST00000562385 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
TNFRSF17-203ENST00000562385 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
TNFRSF17-203ENST00000562385 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
TNFRSF17-203ENST00000562385 METRNQ9UJH8 293 aa10.16□□□□□ -0.78
TNFRSF17-203ENST00000562385 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
TNFRSF17-203ENST00000562385 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms