RNA–Protein interactions for RNA: ENST00000561591.1

CRNDE-211, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-211ENST00000561591 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
CRNDE-211ENST00000561591 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
CRNDE-211ENST00000561591 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
CRNDE-211ENST00000561591 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
CRNDE-211ENST00000561591 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
CRNDE-211ENST00000561591 FOXD1Q16676 465 aa13.51□□□□□ -0.25
CRNDE-211ENST00000561591 ADRA2BP18089 450 aa12.99□□□□□ -0.33
CRNDE-211ENST00000561591 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CRNDE-211ENST00000561591 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
CRNDE-211ENST00000561591 MSH5O43196 834 aa12.53□□□□□ -0.4
CRNDE-211ENST00000561591 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
CRNDE-211ENST00000561591 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
CRNDE-211ENST00000561591 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
CRNDE-211ENST00000561591 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
CRNDE-211ENST00000561591 KCNA4P22459 653 aa11.65□□□□□ -0.54
CRNDE-211ENST00000561591 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
CRNDE-211ENST00000561591 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
CRNDE-211ENST00000561591 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
CRNDE-211ENST00000561591 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
CRNDE-211ENST00000561591 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
CRNDE-211ENST00000561591 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
CRNDE-211ENST00000561591 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
CRNDE-211ENST00000561591 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
CRNDE-211ENST00000561591 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
CRNDE-211ENST00000561591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
CRNDE-211ENST00000561591 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
CRNDE-211ENST00000561591 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
CRNDE-211ENST00000561591 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
CRNDE-211ENST00000561591 ZBTB22O15209 634 aa10.69□□□□□ -0.7
CRNDE-211ENST00000561591 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
CRNDE-211ENST00000561591 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
CRNDE-211ENST00000561591 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
CRNDE-211ENST00000561591 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
CRNDE-211ENST00000561591 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
CRNDE-211ENST00000561591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-211ENST00000561591 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
CRNDE-211ENST00000561591 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
CRNDE-211ENST00000561591 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
CRNDE-211ENST00000561591 APLP2Q06481 763 aa10.5□□□□□ -0.73
CRNDE-211ENST00000561591 CAPN15O75808 1086 aa10.41□□□□□ -0.74
CRNDE-211ENST00000561591 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
CRNDE-211ENST00000561591 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
CRNDE-211ENST00000561591 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
CRNDE-211ENST00000561591 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
CRNDE-211ENST00000561591 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
CRNDE-211ENST00000561591 ABCB7O75027 752 aa10.18□□□□□ -0.78
CRNDE-211ENST00000561591 DSG3P32926 999 aa10.17□□□□□ -0.78
CRNDE-211ENST00000561591 POLA2Q14181 598 aa10.14□□□□□ -0.79
CRNDE-211ENST00000561591 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
CRNDE-211ENST00000561591 FBLN2P98095 1184 aa9.96□□□□□ -0.82
CRNDE-211ENST00000561591 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-211ENST00000561591 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
CRNDE-211ENST00000561591 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
CRNDE-211ENST00000561591 SPDYE2BA6NHP3 402 aa9.69□□□□□ -0.86
CRNDE-211ENST00000561591 SPDYE6P0CI01 402 aa9.69□□□□□ -0.86
CRNDE-211ENST00000561591 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
CRNDE-211ENST00000561591 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
CRNDE-211ENST00000561591 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
CRNDE-211ENST00000561591 FKBP8Q14318 412 aa9.66□□□□□ -0.86
CRNDE-211ENST00000561591 AKT1S1Q96B36 256 aa9.59□□□□□ -0.87
CRNDE-211ENST00000561591 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
CRNDE-211ENST00000561591 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
CRNDE-211ENST00000561591 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
CRNDE-211ENST00000561591 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
CRNDE-211ENST00000561591 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
CRNDE-211ENST00000561591 PROM2Q8N271 834 aa9.41□□□□□ -0.9
CRNDE-211ENST00000561591 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
CRNDE-211ENST00000561591 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
CRNDE-211ENST00000561591 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
CRNDE-211ENST00000561591 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
CRNDE-211ENST00000561591 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
CRNDE-211ENST00000561591 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
CRNDE-211ENST00000561591 MIER1Q8N108 512 aa9.21□□□□□ -0.94
CRNDE-211ENST00000561591 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
CRNDE-211ENST00000561591 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
CRNDE-211ENST00000561591 VASPP50552 380 aaPredicted RBP9.18□□□□□ -0.94
CRNDE-211ENST00000561591 FXR2P51116 673 aaKnown RBP eCLIP9.18□□□□□ -0.94
CRNDE-211ENST00000561591 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
CRNDE-211ENST00000561591 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
CRNDE-211ENST00000561591 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
CRNDE-211ENST00000561591 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
CRNDE-211ENST00000561591 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-211ENST00000561591 POTEHQ6S545 545 aa9.07□□□□□ -0.96
CRNDE-211ENST00000561591 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
CRNDE-211ENST00000561591 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
CRNDE-211ENST00000561591 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
CRNDE-211ENST00000561591 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
CRNDE-211ENST00000561591 SPOCK2Q92563 424 aa8.97□□□□□ -0.97
CRNDE-211ENST00000561591 HAX1O00165 279 aa8.96□□□□□ -0.98
CRNDE-211ENST00000561591 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-211ENST00000561591 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
CRNDE-211ENST00000561591 NUBP1P53384 320 aa8.9□□□□□ -0.98
CRNDE-211ENST00000561591 FAM212AQ96EL1 285 aa8.9□□□□□ -0.98
CRNDE-211ENST00000561591 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
CRNDE-211ENST00000561591 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
CRNDE-211ENST00000561591 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
CRNDE-211ENST00000561591 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
CRNDE-211ENST00000561591 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-211ENST00000561591 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
CRNDE-211ENST00000561591 GSE1Q14687 1217 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms