RNA–Protein interactions for RNA: ENST00000561285.5

LRRC49-229, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-229ENST00000561285 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
LRRC49-229ENST00000561285 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
LRRC49-229ENST00000561285 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
LRRC49-229ENST00000561285 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
LRRC49-229ENST00000561285 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
LRRC49-229ENST00000561285 FOXD1Q16676 465 aa15.89■□□□□ 0.13
LRRC49-229ENST00000561285 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
LRRC49-229ENST00000561285 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
LRRC49-229ENST00000561285 ADRA2BP18089 450 aa15.09■□□□□ 0.01
LRRC49-229ENST00000561285 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
LRRC49-229ENST00000561285 MSH5O43196 834 aa14.75□□□□□ -0.05
LRRC49-229ENST00000561285 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
LRRC49-229ENST00000561285 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
LRRC49-229ENST00000561285 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
LRRC49-229ENST00000561285 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
LRRC49-229ENST00000561285 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
LRRC49-229ENST00000561285 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
LRRC49-229ENST00000561285 KCNA4P22459 653 aa13.54□□□□□ -0.24
LRRC49-229ENST00000561285 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
LRRC49-229ENST00000561285 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
LRRC49-229ENST00000561285 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
LRRC49-229ENST00000561285 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
LRRC49-229ENST00000561285 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
LRRC49-229ENST00000561285 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
LRRC49-229ENST00000561285 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
LRRC49-229ENST00000561285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRRC49-229ENST00000561285 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
LRRC49-229ENST00000561285 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
LRRC49-229ENST00000561285 POTEHQ6S545 545 aa12.57□□□□□ -0.4
LRRC49-229ENST00000561285 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
LRRC49-229ENST00000561285 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
LRRC49-229ENST00000561285 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
LRRC49-229ENST00000561285 ZBTB22O15209 634 aa12.42□□□□□ -0.42
LRRC49-229ENST00000561285 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
LRRC49-229ENST00000561285 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
LRRC49-229ENST00000561285 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
LRRC49-229ENST00000561285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
LRRC49-229ENST00000561285 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
LRRC49-229ENST00000561285 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
LRRC49-229ENST00000561285 APLP2Q06481 763 aa12.28□□□□□ -0.44
LRRC49-229ENST00000561285 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
LRRC49-229ENST00000561285 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
LRRC49-229ENST00000561285 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
LRRC49-229ENST00000561285 CAPN15O75808 1086 aa12.02□□□□□ -0.49
LRRC49-229ENST00000561285 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
LRRC49-229ENST00000561285 DSG3P32926 999 aa11.94□□□□□ -0.5
LRRC49-229ENST00000561285 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
LRRC49-229ENST00000561285 ABCB7O75027 752 aa11.76□□□□□ -0.53
LRRC49-229ENST00000561285 POLA2Q14181 598 aa11.76□□□□□ -0.53
LRRC49-229ENST00000561285 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
LRRC49-229ENST00000561285 FBLN2P98095 1184 aa11.59□□□□□ -0.55
LRRC49-229ENST00000561285 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
LRRC49-229ENST00000561285 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
LRRC49-229ENST00000561285 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
LRRC49-229ENST00000561285 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
LRRC49-229ENST00000561285 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
LRRC49-229ENST00000561285 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
LRRC49-229ENST00000561285 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
LRRC49-229ENST00000561285 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
LRRC49-229ENST00000561285 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
LRRC49-229ENST00000561285 FKBP8Q14318 412 aa11.21□□□□□ -0.61
LRRC49-229ENST00000561285 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
LRRC49-229ENST00000561285 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
LRRC49-229ENST00000561285 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
LRRC49-229ENST00000561285 PROM2Q8N271 834 aa11.08□□□□□ -0.64
LRRC49-229ENST00000561285 PABPN1Q86U42 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
LRRC49-229ENST00000561285 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
LRRC49-229ENST00000561285 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
LRRC49-229ENST00000561285 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
LRRC49-229ENST00000561285 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
LRRC49-229ENST00000561285 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
LRRC49-229ENST00000561285 FBXO3Q9UK99 471 aa10.93□□□□□ -0.66
LRRC49-229ENST00000561285 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
LRRC49-229ENST00000561285 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
LRRC49-229ENST00000561285 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
LRRC49-229ENST00000561285 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
LRRC49-229ENST00000561285 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
LRRC49-229ENST00000561285 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
LRRC49-229ENST00000561285 MIER1Q8N108 512 aa10.67□□□□□ -0.7
LRRC49-229ENST00000561285 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
LRRC49-229ENST00000561285 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
LRRC49-229ENST00000561285 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
LRRC49-229ENST00000561285 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
LRRC49-229ENST00000561285 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
LRRC49-229ENST00000561285 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
LRRC49-229ENST00000561285 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
LRRC49-229ENST00000561285 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
LRRC49-229ENST00000561285 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
LRRC49-229ENST00000561285 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
LRRC49-229ENST00000561285 C19orf67A6NJJ6 358 aa10.46□□□□□ -0.73
LRRC49-229ENST00000561285 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
LRRC49-229ENST00000561285 HAX1O00165 279 aa10.43□□□□□ -0.74
LRRC49-229ENST00000561285 LHX8Q68G74 356 aa10.43□□□□□ -0.74
LRRC49-229ENST00000561285 NUBP1P53384 320 aa10.39□□□□□ -0.75
LRRC49-229ENST00000561285 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
LRRC49-229ENST00000561285 EVX2Q03828 476 aa10.36□□□□□ -0.75
LRRC49-229ENST00000561285 GSE1Q14687 1217 aa10.35□□□□□ -0.75
LRRC49-229ENST00000561285 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
LRRC49-229ENST00000561285 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
LRRC49-229ENST00000561285 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms