RNA–Protein interactions for RNA: ENST00000560557.1

FAM227B-211, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 438 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-211ENST00000560557 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
FAM227B-211ENST00000560557 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
FAM227B-211ENST00000560557 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
FAM227B-211ENST00000560557 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
FAM227B-211ENST00000560557 FOXD1Q16676 465 aa21.8■■□□□ 1.08
FAM227B-211ENST00000560557 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
FAM227B-211ENST00000560557 MSH5O43196 834 aa20.64■□□□□ 0.89
FAM227B-211ENST00000560557 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
FAM227B-211ENST00000560557 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
FAM227B-211ENST00000560557 ADRA2BP18089 450 aa19.72■□□□□ 0.75
FAM227B-211ENST00000560557 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
FAM227B-211ENST00000560557 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
FAM227B-211ENST00000560557 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
FAM227B-211ENST00000560557 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
FAM227B-211ENST00000560557 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
FAM227B-211ENST00000560557 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
FAM227B-211ENST00000560557 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
FAM227B-211ENST00000560557 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
FAM227B-211ENST00000560557 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
FAM227B-211ENST00000560557 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
FAM227B-211ENST00000560557 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
FAM227B-211ENST00000560557 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
FAM227B-211ENST00000560557 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
FAM227B-211ENST00000560557 POTEHQ6S545 545 aa16.62■□□□□ 0.25
FAM227B-211ENST00000560557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
FAM227B-211ENST00000560557 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
FAM227B-211ENST00000560557 DSG3P32926 999 aa16.22■□□□□ 0.19
FAM227B-211ENST00000560557 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
FAM227B-211ENST00000560557 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
FAM227B-211ENST00000560557 CAPN15O75808 1086 aa16.1■□□□□ 0.17
FAM227B-211ENST00000560557 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
FAM227B-211ENST00000560557 ABCB7O75027 752 aa15.69■□□□□ 0.1
FAM227B-211ENST00000560557 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
FAM227B-211ENST00000560557 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
FAM227B-211ENST00000560557 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
FAM227B-211ENST00000560557 APLP2Q06481 763 aa15.54■□□□□ 0.08
FAM227B-211ENST00000560557 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
FAM227B-211ENST00000560557 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
FAM227B-211ENST00000560557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
FAM227B-211ENST00000560557 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
FAM227B-211ENST00000560557 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
FAM227B-211ENST00000560557 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
FAM227B-211ENST00000560557 KCNA4P22459 653 aa15.13■□□□□ 0.01
FAM227B-211ENST00000560557 POLA2Q14181 598 aa15.09■□□□□ 0.01
FAM227B-211ENST00000560557 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
FAM227B-211ENST00000560557 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
FAM227B-211ENST00000560557 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
FAM227B-211ENST00000560557 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
FAM227B-211ENST00000560557 HAX1O00165 279 aa14.81□□□□□ -0.04
FAM227B-211ENST00000560557 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
FAM227B-211ENST00000560557 PITPNM1O00562 1244 aa14.69□□□□□ -0.06
FAM227B-211ENST00000560557 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
FAM227B-211ENST00000560557 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
FAM227B-211ENST00000560557 EVX2Q03828 476 aa14.63□□□□□ -0.07
FAM227B-211ENST00000560557 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
FAM227B-211ENST00000560557 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
FAM227B-211ENST00000560557 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
FAM227B-211ENST00000560557 LHX8Q68G74 356 aa14.28□□□□□ -0.12
FAM227B-211ENST00000560557 C19orf67A6NJJ6 358 aa14.26□□□□□ -0.13
FAM227B-211ENST00000560557 GABBR2O75899 941 aa14.23□□□□□ -0.13
FAM227B-211ENST00000560557 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
FAM227B-211ENST00000560557 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
FAM227B-211ENST00000560557 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
FAM227B-211ENST00000560557 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
FAM227B-211ENST00000560557 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
FAM227B-211ENST00000560557 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
FAM227B-211ENST00000560557 FBLN2P98095 1184 aa14.03□□□□□ -0.16
FAM227B-211ENST00000560557 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
FAM227B-211ENST00000560557 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
FAM227B-211ENST00000560557 PLSCR2Q9NRY7 297 aa13.96□□□□□ -0.17
FAM227B-211ENST00000560557 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
FAM227B-211ENST00000560557 ATXN8OSP0DMR3 200 aa13.94□□□□□ -0.18
FAM227B-211ENST00000560557 ZBTB22O15209 634 aa13.93□□□□□ -0.18
FAM227B-211ENST00000560557 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
FAM227B-211ENST00000560557 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
FAM227B-211ENST00000560557 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
FAM227B-211ENST00000560557 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
FAM227B-211ENST00000560557 CLCN6P51797 869 aa13.71□□□□□ -0.21
FAM227B-211ENST00000560557 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
FAM227B-211ENST00000560557 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
FAM227B-211ENST00000560557 DCBLD2Q96PD2 775 aa13.66□□□□□ -0.22
FAM227B-211ENST00000560557 OTUD5Q96G74 571 aa13.56□□□□□ -0.24
FAM227B-211ENST00000560557 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
FAM227B-211ENST00000560557 POTEMA6NI47 508 aa13.49□□□□□ -0.25
FAM227B-211ENST00000560557 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
FAM227B-211ENST00000560557 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
FAM227B-211ENST00000560557 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
FAM227B-211ENST00000560557 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
FAM227B-211ENST00000560557 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
FAM227B-211ENST00000560557 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
FAM227B-211ENST00000560557 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
FAM227B-211ENST00000560557 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
FAM227B-211ENST00000560557 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
FAM227B-211ENST00000560557 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
FAM227B-211ENST00000560557 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
FAM227B-211ENST00000560557 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
FAM227B-211ENST00000560557 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
FAM227B-211ENST00000560557 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
FAM227B-211ENST00000560557 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
FAM227B-211ENST00000560557 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms