RNA–Protein interactions for RNA: ENST00000560456.5

ZHX3-219, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 5

Gene ZHX3, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-219ENST00000560456 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
ZHX3-219ENST00000560456 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
ZHX3-219ENST00000560456 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
ZHX3-219ENST00000560456 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
ZHX3-219ENST00000560456 FOXD1Q16676 465 aa20.93■□□□□ 0.94
ZHX3-219ENST00000560456 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
ZHX3-219ENST00000560456 MSH5O43196 834 aa19.91■□□□□ 0.78
ZHX3-219ENST00000560456 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
ZHX3-219ENST00000560456 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
ZHX3-219ENST00000560456 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
ZHX3-219ENST00000560456 ADRA2BP18089 450 aa18.92■□□□□ 0.62
ZHX3-219ENST00000560456 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
ZHX3-219ENST00000560456 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
ZHX3-219ENST00000560456 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
ZHX3-219ENST00000560456 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
ZHX3-219ENST00000560456 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
ZHX3-219ENST00000560456 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
ZHX3-219ENST00000560456 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
ZHX3-219ENST00000560456 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
ZHX3-219ENST00000560456 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
ZHX3-219ENST00000560456 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
ZHX3-219ENST00000560456 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
ZHX3-219ENST00000560456 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
ZHX3-219ENST00000560456 POTEHQ6S545 545 aa16■□□□□ 0.15
ZHX3-219ENST00000560456 KCNA4P22459 653 aa15.95■□□□□ 0.14
ZHX3-219ENST00000560456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
ZHX3-219ENST00000560456 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
ZHX3-219ENST00000560456 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
ZHX3-219ENST00000560456 DSG3P32926 999 aa15.59■□□□□ 0.09
ZHX3-219ENST00000560456 CAPN15O75808 1086 aa15.5■□□□□ 0.07
ZHX3-219ENST00000560456 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
ZHX3-219ENST00000560456 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
ZHX3-219ENST00000560456 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
ZHX3-219ENST00000560456 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
ZHX3-219ENST00000560456 APLP2Q06481 763 aa15.08■□□□□ 0
ZHX3-219ENST00000560456 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
ZHX3-219ENST00000560456 ABCB7O75027 752 aa15.05■□□□□ -0
ZHX3-219ENST00000560456 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
ZHX3-219ENST00000560456 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
ZHX3-219ENST00000560456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
ZHX3-219ENST00000560456 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
ZHX3-219ENST00000560456 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
ZHX3-219ENST00000560456 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
ZHX3-219ENST00000560456 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
ZHX3-219ENST00000560456 ZBTB22O15209 634 aa14.71□□□□□ -0.05
ZHX3-219ENST00000560456 SP7Q8TDD2 431 aaPredicted RBP14.67□□□□□ -0.06
ZHX3-219ENST00000560456 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
ZHX3-219ENST00000560456 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
ZHX3-219ENST00000560456 POLA2Q14181 598 aa14.53□□□□□ -0.08
ZHX3-219ENST00000560456 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
ZHX3-219ENST00000560456 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
ZHX3-219ENST00000560456 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
ZHX3-219ENST00000560456 HAX1O00165 279 aa14.27□□□□□ -0.13
ZHX3-219ENST00000560456 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
ZHX3-219ENST00000560456 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
ZHX3-219ENST00000560456 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
ZHX3-219ENST00000560456 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
ZHX3-219ENST00000560456 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
ZHX3-219ENST00000560456 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
ZHX3-219ENST00000560456 EVX2Q03828 476 aa14□□□□□ -0.17
ZHX3-219ENST00000560456 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
ZHX3-219ENST00000560456 LHX8Q68G74 356 aa13.75□□□□□ -0.21
ZHX3-219ENST00000560456 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
ZHX3-219ENST00000560456 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
ZHX3-219ENST00000560456 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
ZHX3-219ENST00000560456 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
ZHX3-219ENST00000560456 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
ZHX3-219ENST00000560456 GABBR2O75899 941 aa13.68□□□□□ -0.22
ZHX3-219ENST00000560456 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
ZHX3-219ENST00000560456 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
ZHX3-219ENST00000560456 FBLN2P98095 1184 aa13.56□□□□□ -0.24
ZHX3-219ENST00000560456 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
ZHX3-219ENST00000560456 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
ZHX3-219ENST00000560456 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
ZHX3-219ENST00000560456 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
ZHX3-219ENST00000560456 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
ZHX3-219ENST00000560456 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
ZHX3-219ENST00000560456 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
ZHX3-219ENST00000560456 CLCN6P51797 869 aa13.32□□□□□ -0.28
ZHX3-219ENST00000560456 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
ZHX3-219ENST00000560456 FKBP8Q14318 412 aa13.2□□□□□ -0.3
ZHX3-219ENST00000560456 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZHX3-219ENST00000560456 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
ZHX3-219ENST00000560456 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
ZHX3-219ENST00000560456 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
ZHX3-219ENST00000560456 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
ZHX3-219ENST00000560456 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
ZHX3-219ENST00000560456 POTEMA6NI47 508 aa12.97□□□□□ -0.33
ZHX3-219ENST00000560456 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
ZHX3-219ENST00000560456 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
ZHX3-219ENST00000560456 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
ZHX3-219ENST00000560456 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
ZHX3-219ENST00000560456 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
ZHX3-219ENST00000560456 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
ZHX3-219ENST00000560456 PROM2Q8N271 834 aa12.86□□□□□ -0.35
ZHX3-219ENST00000560456 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
ZHX3-219ENST00000560456 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
ZHX3-219ENST00000560456 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
ZHX3-219ENST00000560456 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
ZHX3-219ENST00000560456 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms