RNA–Protein interactions for RNA: ENST00000559823.1

APH1B-206, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-206ENST00000559823 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
APH1B-206ENST00000559823 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
APH1B-206ENST00000559823 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
APH1B-206ENST00000559823 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
APH1B-206ENST00000559823 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
APH1B-206ENST00000559823 FOXD1Q16676 465 aa14.29□□□□□ -0.12
APH1B-206ENST00000559823 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
APH1B-206ENST00000559823 ADRA2BP18089 450 aa13.68□□□□□ -0.22
APH1B-206ENST00000559823 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
APH1B-206ENST00000559823 MSH5O43196 834 aa13.17□□□□□ -0.3
APH1B-206ENST00000559823 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
APH1B-206ENST00000559823 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
APH1B-206ENST00000559823 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
APH1B-206ENST00000559823 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
APH1B-206ENST00000559823 KCNA4P22459 653 aa12.27□□□□□ -0.45
APH1B-206ENST00000559823 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
APH1B-206ENST00000559823 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
APH1B-206ENST00000559823 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
APH1B-206ENST00000559823 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
APH1B-206ENST00000559823 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
APH1B-206ENST00000559823 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
APH1B-206ENST00000559823 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
APH1B-206ENST00000559823 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
APH1B-206ENST00000559823 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
APH1B-206ENST00000559823 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
APH1B-206ENST00000559823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.59
APH1B-206ENST00000559823 ZBTB22O15209 634 aa11.32□□□□□ -0.6
APH1B-206ENST00000559823 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
APH1B-206ENST00000559823 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
APH1B-206ENST00000559823 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
APH1B-206ENST00000559823 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
APH1B-206ENST00000559823 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
APH1B-206ENST00000559823 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
APH1B-206ENST00000559823 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
APH1B-206ENST00000559823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
APH1B-206ENST00000559823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
APH1B-206ENST00000559823 SAMD1Q6SPF0 538 aaPredicted RBP11.02□□□□□ -0.65
APH1B-206ENST00000559823 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
APH1B-206ENST00000559823 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
APH1B-206ENST00000559823 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
APH1B-206ENST00000559823 APLP2Q06481 763 aa10.93□□□□□ -0.66
APH1B-206ENST00000559823 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
APH1B-206ENST00000559823 CAPN15O75808 1086 aa10.84□□□□□ -0.67
APH1B-206ENST00000559823 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
APH1B-206ENST00000559823 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
APH1B-206ENST00000559823 DSG3P32926 999 aa10.74□□□□□ -0.69
APH1B-206ENST00000559823 ABCB7O75027 752 aa10.64□□□□□ -0.71
APH1B-206ENST00000559823 POLA2Q14181 598 aa10.63□□□□□ -0.71
APH1B-206ENST00000559823 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
APH1B-206ENST00000559823 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
APH1B-206ENST00000559823 FBLN2P98095 1184 aa10.36□□□□□ -0.75
APH1B-206ENST00000559823 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
APH1B-206ENST00000559823 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
APH1B-206ENST00000559823 SPDYE2BA6NHP3 402 aa10.18□□□□□ -0.78
APH1B-206ENST00000559823 SPDYE6P0CI01 402 aa10.18□□□□□ -0.78
APH1B-206ENST00000559823 SPDYE2Q495Y8 402 aa10.18□□□□□ -0.78
APH1B-206ENST00000559823 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
APH1B-206ENST00000559823 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
APH1B-206ENST00000559823 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
APH1B-206ENST00000559823 AKT1S1Q96B36 256 aa10.09□□□□□ -0.79
APH1B-206ENST00000559823 FKBP8Q14318 412 aa10.08□□□□□ -0.8
APH1B-206ENST00000559823 PROM2Q8N271 834 aa10.03□□□□□ -0.8
APH1B-206ENST00000559823 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
APH1B-206ENST00000559823 PABPN1Q86U42 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
APH1B-206ENST00000559823 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
APH1B-206ENST00000559823 SPDYE1Q8NFV5 336 aaPredicted RBP9.87□□□□□ -0.83
APH1B-206ENST00000559823 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
APH1B-206ENST00000559823 STAG3Q9UJ98 1225 aa9.8□□□□□ -0.84
APH1B-206ENST00000559823 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
APH1B-206ENST00000559823 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
APH1B-206ENST00000559823 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
APH1B-206ENST00000559823 FXR2P51116 673 aaKnown RBP eCLIP9.72□□□□□ -0.85
APH1B-206ENST00000559823 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
APH1B-206ENST00000559823 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
APH1B-206ENST00000559823 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
APH1B-206ENST00000559823 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
APH1B-206ENST00000559823 CHADLQ6NUI6 762 aa9.59□□□□□ -0.87
APH1B-206ENST00000559823 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
APH1B-206ENST00000559823 MIER1Q8N108 512 aa9.57□□□□□ -0.88
APH1B-206ENST00000559823 POTEHQ6S545 545 aa9.54□□□□□ -0.88
APH1B-206ENST00000559823 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
APH1B-206ENST00000559823 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
APH1B-206ENST00000559823 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
APH1B-206ENST00000559823 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
APH1B-206ENST00000559823 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
APH1B-206ENST00000559823 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
APH1B-206ENST00000559823 NUBP1P53384 320 aa9.41□□□□□ -0.9
APH1B-206ENST00000559823 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
APH1B-206ENST00000559823 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
APH1B-206ENST00000559823 SPOCK2Q92563 424 aa9.37□□□□□ -0.91
APH1B-206ENST00000559823 RASEFQ8IZ41 740 aa9.35□□□□□ -0.91
APH1B-206ENST00000559823 HAX1O00165 279 aa9.32□□□□□ -0.92
APH1B-206ENST00000559823 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
APH1B-206ENST00000559823 EVX2Q03828 476 aa9.32□□□□□ -0.92
APH1B-206ENST00000559823 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
APH1B-206ENST00000559823 TSPYL2Q9H2G4 693 aaPredicted RBP9.26□□□□□ -0.93
APH1B-206ENST00000559823 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
APH1B-206ENST00000559823 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
APH1B-206ENST00000559823 PAK3O75914 559 aaPredicted RBP9.24□□□□□ -0.93
APH1B-206ENST00000559823 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms