RNA–Protein interactions for RNA: ENST00000559242.5

USP8-207, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-207ENST00000559242 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
USP8-207ENST00000559242 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
USP8-207ENST00000559242 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
USP8-207ENST00000559242 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
USP8-207ENST00000559242 FOXD1Q16676 465 aa19.6■□□□□ 0.73
USP8-207ENST00000559242 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
USP8-207ENST00000559242 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
USP8-207ENST00000559242 ADRA2BP18089 450 aa18.83■□□□□ 0.6
USP8-207ENST00000559242 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
USP8-207ENST00000559242 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
USP8-207ENST00000559242 MSH5O43196 834 aa17.96■□□□□ 0.47
USP8-207ENST00000559242 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
USP8-207ENST00000559242 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
USP8-207ENST00000559242 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
USP8-207ENST00000559242 KCNA4P22459 653 aa16.89■□□□□ 0.29
USP8-207ENST00000559242 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
USP8-207ENST00000559242 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
USP8-207ENST00000559242 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
USP8-207ENST00000559242 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
USP8-207ENST00000559242 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
USP8-207ENST00000559242 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
USP8-207ENST00000559242 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
USP8-207ENST00000559242 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
USP8-207ENST00000559242 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
USP8-207ENST00000559242 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
USP8-207ENST00000559242 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
USP8-207ENST00000559242 ZBTB22O15209 634 aa15.61■□□□□ 0.09
USP8-207ENST00000559242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.098e-7■■□□□ 12.8
USP8-207ENST00000559242 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
USP8-207ENST00000559242 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
USP8-207ENST00000559242 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
USP8-207ENST00000559242 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
USP8-207ENST00000559242 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
USP8-207ENST00000559242 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
USP8-207ENST00000559242 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
USP8-207ENST00000559242 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
USP8-207ENST00000559242 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
USP8-207ENST00000559242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
USP8-207ENST00000559242 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
USP8-207ENST00000559242 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
USP8-207ENST00000559242 CAPN15O75808 1086 aa14.89□□□□□ -0.03
USP8-207ENST00000559242 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
USP8-207ENST00000559242 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
USP8-207ENST00000559242 APLP2Q06481 763 aa14.81□□□□□ -0.04
USP8-207ENST00000559242 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
USP8-207ENST00000559242 DSG3P32926 999 aa14.72□□□□□ -0.05
USP8-207ENST00000559242 ABCB7O75027 752 aa14.68□□□□□ -0.06
USP8-207ENST00000559242 POLA2Q14181 598 aa14.6□□□□□ -0.07
USP8-207ENST00000559242 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
USP8-207ENST00000559242 POTEHQ6S545 545 aa14.3□□□□□ -0.12
USP8-207ENST00000559242 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
USP8-207ENST00000559242 FBLN2P98095 1184 aa14.15□□□□□ -0.14
USP8-207ENST00000559242 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
USP8-207ENST00000559242 FKBP8Q14318 412 aa13.89□□□□□ -0.19
USP8-207ENST00000559242 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
USP8-207ENST00000559242 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
USP8-207ENST00000559242 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
USP8-207ENST00000559242 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
USP8-207ENST00000559242 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
USP8-207ENST00000559242 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
USP8-207ENST00000559242 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
USP8-207ENST00000559242 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
USP8-207ENST00000559242 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP8-207ENST00000559242 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
USP8-207ENST00000559242 PROM2Q8N271 834 aa13.68□□□□□ -0.22
USP8-207ENST00000559242 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
USP8-207ENST00000559242 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
USP8-207ENST00000559242 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
USP8-207ENST00000559242 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
USP8-207ENST00000559242 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
USP8-207ENST00000559242 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
USP8-207ENST00000559242 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.285e-6■■■□□ 14.9
USP8-207ENST00000559242 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
USP8-207ENST00000559242 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
USP8-207ENST00000559242 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
USP8-207ENST00000559242 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
USP8-207ENST00000559242 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
USP8-207ENST00000559242 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
USP8-207ENST00000559242 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
USP8-207ENST00000559242 MIER1Q8N108 512 aa13.15□□□□□ -0.3
USP8-207ENST00000559242 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
USP8-207ENST00000559242 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
USP8-207ENST00000559242 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
USP8-207ENST00000559242 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
USP8-207ENST00000559242 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
USP8-207ENST00000559242 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
USP8-207ENST00000559242 NUBP1P53384 320 aa12.89□□□□□ -0.35
USP8-207ENST00000559242 EVX2Q03828 476 aa12.87□□□□□ -0.35
USP8-207ENST00000559242 HAX1O00165 279 aa12.85□□□□□ -0.35
USP8-207ENST00000559242 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP8-207ENST00000559242 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
USP8-207ENST00000559242 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
USP8-207ENST00000559242 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
USP8-207ENST00000559242 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
USP8-207ENST00000559242 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
USP8-207ENST00000559242 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
USP8-207ENST00000559242 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
USP8-207ENST00000559242 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
USP8-207ENST00000559242 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
USP8-207ENST00000559242 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms