RNA–Protein interactions for RNA: ENST00000559184.5

SEMA6D-212, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-212ENST00000559184 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
SEMA6D-212ENST00000559184 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
SEMA6D-212ENST00000559184 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
SEMA6D-212ENST00000559184 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
SEMA6D-212ENST00000559184 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
SEMA6D-212ENST00000559184 FOXD1Q16676 465 aa20.99■□□□□ 0.95
SEMA6D-212ENST00000559184 ADRA2BP18089 450 aa20.15■□□□□ 0.82
SEMA6D-212ENST00000559184 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
SEMA6D-212ENST00000559184 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
SEMA6D-212ENST00000559184 MSH5O43196 834 aa19.41■□□□□ 0.7
SEMA6D-212ENST00000559184 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
SEMA6D-212ENST00000559184 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
SEMA6D-212ENST00000559184 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
SEMA6D-212ENST00000559184 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
SEMA6D-212ENST00000559184 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
SEMA6D-212ENST00000559184 KCNA4P22459 653 aa18.06■□□□□ 0.48
SEMA6D-212ENST00000559184 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
SEMA6D-212ENST00000559184 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
SEMA6D-212ENST00000559184 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
SEMA6D-212ENST00000559184 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
SEMA6D-212ENST00000559184 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
SEMA6D-212ENST00000559184 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
SEMA6D-212ENST00000559184 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
SEMA6D-212ENST00000559184 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
SEMA6D-212ENST00000559184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEMA6D-212ENST00000559184 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
SEMA6D-212ENST00000559184 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
SEMA6D-212ENST00000559184 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
SEMA6D-212ENST00000559184 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
SEMA6D-212ENST00000559184 ZBTB22O15209 634 aa16.59■□□□□ 0.25
SEMA6D-212ENST00000559184 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
SEMA6D-212ENST00000559184 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SEMA6D-212ENST00000559184 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
SEMA6D-212ENST00000559184 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
SEMA6D-212ENST00000559184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
SEMA6D-212ENST00000559184 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
SEMA6D-212ENST00000559184 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
SEMA6D-212ENST00000559184 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
SEMA6D-212ENST00000559184 APLP2Q06481 763 aa16.22■□□□□ 0.19
SEMA6D-212ENST00000559184 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
SEMA6D-212ENST00000559184 CAPN15O75808 1086 aa16.08■□□□□ 0.16
SEMA6D-212ENST00000559184 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
SEMA6D-212ENST00000559184 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
SEMA6D-212ENST00000559184 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
SEMA6D-212ENST00000559184 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
SEMA6D-212ENST00000559184 DSG3P32926 999 aa15.78■□□□□ 0.12
SEMA6D-212ENST00000559184 ABCB7O75027 752 aa15.77■□□□□ 0.12
SEMA6D-212ENST00000559184 POLA2Q14181 598 aa15.71■□□□□ 0.11
SEMA6D-212ENST00000559184 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
SEMA6D-212ENST00000559184 FBLN2P98095 1184 aa15.39■□□□□ 0.05
SEMA6D-212ENST00000559184 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
SEMA6D-212ENST00000559184 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
SEMA6D-212ENST00000559184 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
SEMA6D-212ENST00000559184 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
SEMA6D-212ENST00000559184 SPDYE6P0CI01 402 aa15.02■□□□□ -0
SEMA6D-212ENST00000559184 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
SEMA6D-212ENST00000559184 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
SEMA6D-212ENST00000559184 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
SEMA6D-212ENST00000559184 FKBP8Q14318 412 aa14.93□□□□□ -0.02
SEMA6D-212ENST00000559184 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
SEMA6D-212ENST00000559184 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
SEMA6D-212ENST00000559184 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
SEMA6D-212ENST00000559184 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
SEMA6D-212ENST00000559184 PROM2Q8N271 834 aa14.65□□□□□ -0.06
SEMA6D-212ENST00000559184 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
SEMA6D-212ENST00000559184 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
SEMA6D-212ENST00000559184 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
SEMA6D-212ENST00000559184 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
SEMA6D-212ENST00000559184 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
SEMA6D-212ENST00000559184 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
SEMA6D-212ENST00000559184 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
SEMA6D-212ENST00000559184 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.13
SEMA6D-212ENST00000559184 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
SEMA6D-212ENST00000559184 MIER1Q8N108 512 aa14.23□□□□□ -0.13
SEMA6D-212ENST00000559184 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
SEMA6D-212ENST00000559184 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
SEMA6D-212ENST00000559184 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
SEMA6D-212ENST00000559184 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
SEMA6D-212ENST00000559184 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
SEMA6D-212ENST00000559184 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
SEMA6D-212ENST00000559184 POTEHQ6S545 545 aa14.06□□□□□ -0.16
SEMA6D-212ENST00000559184 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
SEMA6D-212ENST00000559184 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
SEMA6D-212ENST00000559184 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
SEMA6D-212ENST00000559184 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
SEMA6D-212ENST00000559184 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
SEMA6D-212ENST00000559184 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
SEMA6D-212ENST00000559184 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
SEMA6D-212ENST00000559184 HAX1O00165 279 aa13.85□□□□□ -0.19
SEMA6D-212ENST00000559184 NUBP1P53384 320 aa13.81□□□□□ -0.2
SEMA6D-212ENST00000559184 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
SEMA6D-212ENST00000559184 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
SEMA6D-212ENST00000559184 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
SEMA6D-212ENST00000559184 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
SEMA6D-212ENST00000559184 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
SEMA6D-212ENST00000559184 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
SEMA6D-212ENST00000559184 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
SEMA6D-212ENST00000559184 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
SEMA6D-212ENST00000559184 GSE1Q14687 1217 aa13.69□□□□□ -0.22
SEMA6D-212ENST00000559184 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms