RNA–Protein interactions for RNA: ENST00000559064.1

SEMA6D-211, Transcript of semaphorin 6D, humanhuman

TSL 3

Gene SEMA6D, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-211ENST00000559064 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
SEMA6D-211ENST00000559064 CHIC1Q5VXU3 224 aa28.68■■■□□ 2.18
SEMA6D-211ENST00000559064 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
SEMA6D-211ENST00000559064 PHF23Q9BUL5 403 aaPredicted RBP25.08■■□□□ 1.61
SEMA6D-211ENST00000559064 FOXD1Q16676 465 aa23.34■■□□□ 1.33
SEMA6D-211ENST00000559064 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
SEMA6D-211ENST00000559064 ADRA2BP18089 450 aa22.23■■□□□ 1.15
SEMA6D-211ENST00000559064 PPP6R1Q9UPN7 881 aa22.2■■□□□ 1.14
SEMA6D-211ENST00000559064 PIAS4Q8N2W9 510 aaPredicted RBP22.06■■□□□ 1.12
SEMA6D-211ENST00000559064 MSH5O43196 834 aa21.79■■□□□ 1.08
SEMA6D-211ENST00000559064 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
SEMA6D-211ENST00000559064 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
SEMA6D-211ENST00000559064 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
SEMA6D-211ENST00000559064 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
SEMA6D-211ENST00000559064 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
SEMA6D-211ENST00000559064 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
SEMA6D-211ENST00000559064 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
SEMA6D-211ENST00000559064 KCNA4P22459 653 aa19.61■□□□□ 0.73
SEMA6D-211ENST00000559064 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
SEMA6D-211ENST00000559064 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
SEMA6D-211ENST00000559064 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
SEMA6D-211ENST00000559064 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
SEMA6D-211ENST00000559064 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
SEMA6D-211ENST00000559064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.59
SEMA6D-211ENST00000559064 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
SEMA6D-211ENST00000559064 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
SEMA6D-211ENST00000559064 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
SEMA6D-211ENST00000559064 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
SEMA6D-211ENST00000559064 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
SEMA6D-211ENST00000559064 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.52
SEMA6D-211ENST00000559064 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
SEMA6D-211ENST00000559064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
SEMA6D-211ENST00000559064 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
SEMA6D-211ENST00000559064 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
SEMA6D-211ENST00000559064 APLP2Q06481 763 aa18.1■□□□□ 0.49
SEMA6D-211ENST00000559064 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
SEMA6D-211ENST00000559064 ZBTB22O15209 634 aa17.96■□□□□ 0.47
SEMA6D-211ENST00000559064 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
SEMA6D-211ENST00000559064 CAPN15O75808 1086 aa17.89■□□□□ 0.45
SEMA6D-211ENST00000559064 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
SEMA6D-211ENST00000559064 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
SEMA6D-211ENST00000559064 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
SEMA6D-211ENST00000559064 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
SEMA6D-211ENST00000559064 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
SEMA6D-211ENST00000559064 DSG3P32926 999 aa17.54■□□□□ 0.4
SEMA6D-211ENST00000559064 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
SEMA6D-211ENST00000559064 ABCB7O75027 752 aa17.45■□□□□ 0.38
SEMA6D-211ENST00000559064 POLA2Q14181 598 aa17.35■□□□□ 0.37
SEMA6D-211ENST00000559064 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
SEMA6D-211ENST00000559064 FBLN2P98095 1184 aa17■□□□□ 0.31
SEMA6D-211ENST00000559064 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
SEMA6D-211ENST00000559064 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
SEMA6D-211ENST00000559064 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
SEMA6D-211ENST00000559064 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
SEMA6D-211ENST00000559064 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
SEMA6D-211ENST00000559064 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
SEMA6D-211ENST00000559064 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
SEMA6D-211ENST00000559064 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
SEMA6D-211ENST00000559064 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
SEMA6D-211ENST00000559064 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
SEMA6D-211ENST00000559064 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
SEMA6D-211ENST00000559064 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEMA6D-211ENST00000559064 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
SEMA6D-211ENST00000559064 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
SEMA6D-211ENST00000559064 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
SEMA6D-211ENST00000559064 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
SEMA6D-211ENST00000559064 FKBP8Q14318 412 aa16.12■□□□□ 0.17
SEMA6D-211ENST00000559064 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
SEMA6D-211ENST00000559064 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
SEMA6D-211ENST00000559064 PROM2Q8N271 834 aa15.96■□□□□ 0.15
SEMA6D-211ENST00000559064 POTEHQ6S545 545 aa15.94■□□□□ 0.14
SEMA6D-211ENST00000559064 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
SEMA6D-211ENST00000559064 PIP4P2Q8N4L2 257 aa15.89■□□□□ 0.13
SEMA6D-211ENST00000559064 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
SEMA6D-211ENST00000559064 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
SEMA6D-211ENST00000559064 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
SEMA6D-211ENST00000559064 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
SEMA6D-211ENST00000559064 CREBZFQ9NS37 354 aa15.6■□□□□ 0.09
SEMA6D-211ENST00000559064 MIER1Q8N108 512 aa15.58■□□□□ 0.08
SEMA6D-211ENST00000559064 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
SEMA6D-211ENST00000559064 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
SEMA6D-211ENST00000559064 HAX1O00165 279 aa15.52■□□□□ 0.08
SEMA6D-211ENST00000559064 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
SEMA6D-211ENST00000559064 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
SEMA6D-211ENST00000559064 VASPP50552 380 aaPredicted RBP15.42■□□□□ 0.06
SEMA6D-211ENST00000559064 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
SEMA6D-211ENST00000559064 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
SEMA6D-211ENST00000559064 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
SEMA6D-211ENST00000559064 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
SEMA6D-211ENST00000559064 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
SEMA6D-211ENST00000559064 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
SEMA6D-211ENST00000559064 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
SEMA6D-211ENST00000559064 EVX2Q03828 476 aa15.17■□□□□ 0.02
SEMA6D-211ENST00000559064 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
SEMA6D-211ENST00000559064 CLCN6P51797 869 aa15.13■□□□□ 0.01
SEMA6D-211ENST00000559064 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
SEMA6D-211ENST00000559064 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
SEMA6D-211ENST00000559064 ZNF579Q8NAF0 562 aaKnown RBP15.1■□□□□ 0.01
SEMA6D-211ENST00000559064 SPOCK2Q92563 424 aa15.1■□□□□ 0.01
SEMA6D-211ENST00000559064 NUBP1P53384 320 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms