RNA–Protein interactions for RNA: ENST00000556936.5

CCDC175-204, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-204ENST00000556936 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
CCDC175-204ENST00000556936 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
CCDC175-204ENST00000556936 SENP3Q9H4L4 574 aaPredicted RBP26.63■■□□□ 1.85
CCDC175-204ENST00000556936 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
CCDC175-204ENST00000556936 POTEDQ86YR6 584 aa24.95■■□□□ 1.58
CCDC175-204ENST00000556936 FOXD1Q16676 465 aa24.87■■□□□ 1.57
CCDC175-204ENST00000556936 MSH5O43196 834 aa23.79■■□□□ 1.4
CCDC175-204ENST00000556936 PIAS4Q8N2W9 510 aaPredicted RBP23.01■■□□□ 1.27
CCDC175-204ENST00000556936 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
CCDC175-204ENST00000556936 ADRA2BP18089 450 aa22.26■■□□□ 1.15
CCDC175-204ENST00000556936 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
CCDC175-204ENST00000556936 CACNB1Q02641 598 aaPredicted RBP21.02■□□□□ 0.96
CCDC175-204ENST00000556936 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
CCDC175-204ENST00000556936 MAPK8IP2Q13387 824 aaPredicted RBP20.75■□□□□ 0.91
CCDC175-204ENST00000556936 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
CCDC175-204ENST00000556936 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
CCDC175-204ENST00000556936 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
CCDC175-204ENST00000556936 C1QBPQ07021 282 aaKnown RBP19.83■□□□□ 0.77
CCDC175-204ENST00000556936 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
CCDC175-204ENST00000556936 POTEHQ6S545 545 aa19.36■□□□□ 0.69
CCDC175-204ENST00000556936 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
CCDC175-204ENST00000556936 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
CCDC175-204ENST00000556936 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
CCDC175-204ENST00000556936 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
CCDC175-204ENST00000556936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC175-204ENST00000556936 DSG3P32926 999 aa18.49■□□□□ 0.55
CCDC175-204ENST00000556936 CAPN15O75808 1086 aa18.36■□□□□ 0.53
CCDC175-204ENST00000556936 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
CCDC175-204ENST00000556936 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
CCDC175-204ENST00000556936 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
CCDC175-204ENST00000556936 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
CCDC175-204ENST00000556936 ABCB7O75027 752 aa17.8■□□□□ 0.44
CCDC175-204ENST00000556936 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
CCDC175-204ENST00000556936 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
CCDC175-204ENST00000556936 APLP2Q06481 763 aa17.78■□□□□ 0.44
CCDC175-204ENST00000556936 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
CCDC175-204ENST00000556936 CHRDL2Q6WN34 429 aa17.73■□□□□ 0.43
CCDC175-204ENST00000556936 SP7Q8TDD2 431 aaPredicted RBP17.66■□□□□ 0.42
CCDC175-204ENST00000556936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
CCDC175-204ENST00000556936 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
CCDC175-204ENST00000556936 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
CCDC175-204ENST00000556936 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
CCDC175-204ENST00000556936 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
CCDC175-204ENST00000556936 POLA2Q14181 598 aa17.07■□□□□ 0.32
CCDC175-204ENST00000556936 HAX1O00165 279 aa17.06■□□□□ 0.32
CCDC175-204ENST00000556936 PIP4P2Q8N4L2 257 aa17.05■□□□□ 0.32
CCDC175-204ENST00000556936 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
CCDC175-204ENST00000556936 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC175-204ENST00000556936 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
CCDC175-204ENST00000556936 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
CCDC175-204ENST00000556936 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
CCDC175-204ENST00000556936 EVX2Q03828 476 aa16.67■□□□□ 0.26
CCDC175-204ENST00000556936 KCNA4P22459 653 aa16.62■□□□□ 0.25
CCDC175-204ENST00000556936 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
CCDC175-204ENST00000556936 LHX8Q68G74 356 aa16.54■□□□□ 0.24
CCDC175-204ENST00000556936 PLSCR2Q9NRY7 297 aa16.37■□□□□ 0.21
CCDC175-204ENST00000556936 GABBR2O75899 941 aa16.31■□□□□ 0.2
CCDC175-204ENST00000556936 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
CCDC175-204ENST00000556936 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
CCDC175-204ENST00000556936 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
CCDC175-204ENST00000556936 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
CCDC175-204ENST00000556936 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
CCDC175-204ENST00000556936 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
CCDC175-204ENST00000556936 SPDYE1Q8NFV5 336 aaPredicted RBP16.07■□□□□ 0.16
CCDC175-204ENST00000556936 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
CCDC175-204ENST00000556936 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
CCDC175-204ENST00000556936 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
CCDC175-204ENST00000556936 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CCDC175-204ENST00000556936 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
CCDC175-204ENST00000556936 CLCN6P51797 869 aa15.82■□□□□ 0.12
CCDC175-204ENST00000556936 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
CCDC175-204ENST00000556936 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
CCDC175-204ENST00000556936 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
CCDC175-204ENST00000556936 DCBLD2Q96PD2 775 aa15.69■□□□□ 0.1
CCDC175-204ENST00000556936 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
CCDC175-204ENST00000556936 POTEMA6NI47 508 aa15.64■□□□□ 0.09
CCDC175-204ENST00000556936 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
CCDC175-204ENST00000556936 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
CCDC175-204ENST00000556936 POTEGQ6S5H5 508 aa15.54■□□□□ 0.08
CCDC175-204ENST00000556936 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
CCDC175-204ENST00000556936 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
CCDC175-204ENST00000556936 PCDH10Q9P2E7 1040 aa15.52■□□□□ 0.08
CCDC175-204ENST00000556936 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
CCDC175-204ENST00000556936 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
CCDC175-204ENST00000556936 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC175-204ENST00000556936 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
CCDC175-204ENST00000556936 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
CCDC175-204ENST00000556936 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
CCDC175-204ENST00000556936 ZBTB22O15209 634 aa15.23■□□□□ 0.03
CCDC175-204ENST00000556936 MAMSTRQ6ZN01 415 aa15.07■□□□□ 0
CCDC175-204ENST00000556936 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
CCDC175-204ENST00000556936 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
CCDC175-204ENST00000556936 LCE2DQ5TA82 110 aaPredicted RBP15.02■□□□□ -0
CCDC175-204ENST00000556936 METRNQ9UJH8 293 aa15□□□□□ -0.01
CCDC175-204ENST00000556936 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
CCDC175-204ENST00000556936 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
CCDC175-204ENST00000556936 SLC39A7Q92504 469 aa14.97□□□□□ -0.01
CCDC175-204ENST00000556936 PHF12Q96QT6 1004 aa14.97□□□□□ -0.01
CCDC175-204ENST00000556936 C7P10643 843 aa14.96□□□□□ -0.01
CCDC175-204ENST00000556936 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms