RNA–Protein interactions for RNA: ENST00000555456.1

GPHN-207, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-207ENST00000555456 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
GPHN-207ENST00000555456 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
GPHN-207ENST00000555456 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
GPHN-207ENST00000555456 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
GPHN-207ENST00000555456 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
GPHN-207ENST00000555456 FOXD1Q16676 465 aa16.76■□□□□ 0.27
GPHN-207ENST00000555456 ADRA2BP18089 450 aa16.15■□□□□ 0.18
GPHN-207ENST00000555456 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
GPHN-207ENST00000555456 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
GPHN-207ENST00000555456 MSH5O43196 834 aa15.5■□□□□ 0.07
GPHN-207ENST00000555456 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
GPHN-207ENST00000555456 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
GPHN-207ENST00000555456 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
GPHN-207ENST00000555456 KCNA4P22459 653 aa14.64□□□□□ -0.07
GPHN-207ENST00000555456 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
GPHN-207ENST00000555456 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
GPHN-207ENST00000555456 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
GPHN-207ENST00000555456 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
GPHN-207ENST00000555456 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
GPHN-207ENST00000555456 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
GPHN-207ENST00000555456 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
GPHN-207ENST00000555456 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
GPHN-207ENST00000555456 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
GPHN-207ENST00000555456 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
GPHN-207ENST00000555456 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
GPHN-207ENST00000555456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.24
GPHN-207ENST00000555456 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
GPHN-207ENST00000555456 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
GPHN-207ENST00000555456 ZBTB22O15209 634 aa13.44□□□□□ -0.26
GPHN-207ENST00000555456 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
GPHN-207ENST00000555456 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
GPHN-207ENST00000555456 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
GPHN-207ENST00000555456 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
GPHN-207ENST00000555456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
GPHN-207ENST00000555456 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
GPHN-207ENST00000555456 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
GPHN-207ENST00000555456 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
GPHN-207ENST00000555456 APLP2Q06481 763 aa13.08□□□□□ -0.32
GPHN-207ENST00000555456 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
GPHN-207ENST00000555456 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
GPHN-207ENST00000555456 CAPN15O75808 1086 aa12.91□□□□□ -0.34
GPHN-207ENST00000555456 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
GPHN-207ENST00000555456 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
GPHN-207ENST00000555456 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
GPHN-207ENST00000555456 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
GPHN-207ENST00000555456 ABCB7O75027 752 aa12.65□□□□□ -0.38
GPHN-207ENST00000555456 POLA2Q14181 598 aa12.62□□□□□ -0.39
GPHN-207ENST00000555456 DSG3P32926 999 aa12.61□□□□□ -0.39
GPHN-207ENST00000555456 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
GPHN-207ENST00000555456 FBLN2P98095 1184 aa12.45□□□□□ -0.42
GPHN-207ENST00000555456 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
GPHN-207ENST00000555456 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
GPHN-207ENST00000555456 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
GPHN-207ENST00000555456 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
GPHN-207ENST00000555456 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
GPHN-207ENST00000555456 FKBP8Q14318 412 aa12.2□□□□□ -0.46
GPHN-207ENST00000555456 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
GPHN-207ENST00000555456 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
GPHN-207ENST00000555456 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
GPHN-207ENST00000555456 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
GPHN-207ENST00000555456 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
GPHN-207ENST00000555456 PROM2Q8N271 834 aa11.86□□□□□ -0.51
GPHN-207ENST00000555456 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
GPHN-207ENST00000555456 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
GPHN-207ENST00000555456 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
GPHN-207ENST00000555456 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
GPHN-207ENST00000555456 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
GPHN-207ENST00000555456 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
GPHN-207ENST00000555456 POTEHQ6S545 545 aa11.61□□□□□ -0.55
GPHN-207ENST00000555456 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
GPHN-207ENST00000555456 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
GPHN-207ENST00000555456 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
GPHN-207ENST00000555456 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
GPHN-207ENST00000555456 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
GPHN-207ENST00000555456 MIER1Q8N108 512 aa11.52□□□□□ -0.57
GPHN-207ENST00000555456 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
GPHN-207ENST00000555456 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
GPHN-207ENST00000555456 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
GPHN-207ENST00000555456 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
GPHN-207ENST00000555456 IFNLR1Q8IU57 520 aaPredicted RBP11.39□□□□□ -0.59
GPHN-207ENST00000555456 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
GPHN-207ENST00000555456 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
GPHN-207ENST00000555456 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
GPHN-207ENST00000555456 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
GPHN-207ENST00000555456 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
GPHN-207ENST00000555456 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
GPHN-207ENST00000555456 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
GPHN-207ENST00000555456 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
GPHN-207ENST00000555456 NUBP1P53384 320 aa11.16□□□□□ -0.62
GPHN-207ENST00000555456 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
GPHN-207ENST00000555456 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
GPHN-207ENST00000555456 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
GPHN-207ENST00000555456 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
GPHN-207ENST00000555456 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
GPHN-207ENST00000555456 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
GPHN-207ENST00000555456 GSE1Q14687 1217 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms