RNA–Protein interactions for RNA: ENST00000555456.1

GPHN-207, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 841 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-207ENST00000555456 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
GPHN-207ENST00000555456 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
GPHN-207ENST00000555456 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
GPHN-207ENST00000555456 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
GPHN-207ENST00000555456 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
GPHN-207ENST00000555456 FOXD1Q16676 465 aa16.76■□□□□ 0.27
GPHN-207ENST00000555456 ADRA2BP18089 450 aa16.15■□□□□ 0.18
GPHN-207ENST00000555456 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
GPHN-207ENST00000555456 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
GPHN-207ENST00000555456 MSH5O43196 834 aa15.5■□□□□ 0.07
GPHN-207ENST00000555456 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
GPHN-207ENST00000555456 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
GPHN-207ENST00000555456 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
GPHN-207ENST00000555456 KCNA4P22459 653 aa14.64□□□□□ -0.07
GPHN-207ENST00000555456 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
GPHN-207ENST00000555456 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
GPHN-207ENST00000555456 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
GPHN-207ENST00000555456 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
GPHN-207ENST00000555456 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
GPHN-207ENST00000555456 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
GPHN-207ENST00000555456 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
GPHN-207ENST00000555456 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
GPHN-207ENST00000555456 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
GPHN-207ENST00000555456 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
GPHN-207ENST00000555456 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
GPHN-207ENST00000555456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.24
GPHN-207ENST00000555456 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
GPHN-207ENST00000555456 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
GPHN-207ENST00000555456 ZBTB22O15209 634 aa13.44□□□□□ -0.26
GPHN-207ENST00000555456 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
GPHN-207ENST00000555456 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
GPHN-207ENST00000555456 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
GPHN-207ENST00000555456 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
GPHN-207ENST00000555456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
GPHN-207ENST00000555456 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
GPHN-207ENST00000555456 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
GPHN-207ENST00000555456 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
GPHN-207ENST00000555456 APLP2Q06481 763 aa13.08□□□□□ -0.32
GPHN-207ENST00000555456 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
GPHN-207ENST00000555456 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
GPHN-207ENST00000555456 CAPN15O75808 1086 aa12.91□□□□□ -0.34
GPHN-207ENST00000555456 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
GPHN-207ENST00000555456 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
GPHN-207ENST00000555456 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
GPHN-207ENST00000555456 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
GPHN-207ENST00000555456 ABCB7O75027 752 aa12.65□□□□□ -0.38
GPHN-207ENST00000555456 POLA2Q14181 598 aa12.62□□□□□ -0.39
GPHN-207ENST00000555456 DSG3P32926 999 aa12.61□□□□□ -0.39
GPHN-207ENST00000555456 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
GPHN-207ENST00000555456 FBLN2P98095 1184 aa12.45□□□□□ -0.42
GPHN-207ENST00000555456 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
GPHN-207ENST00000555456 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
GPHN-207ENST00000555456 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
GPHN-207ENST00000555456 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
GPHN-207ENST00000555456 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
GPHN-207ENST00000555456 FKBP8Q14318 412 aa12.2□□□□□ -0.46
GPHN-207ENST00000555456 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
GPHN-207ENST00000555456 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
GPHN-207ENST00000555456 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
GPHN-207ENST00000555456 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
GPHN-207ENST00000555456 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
GPHN-207ENST00000555456 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
GPHN-207ENST00000555456 PROM2Q8N271 834 aa11.86□□□□□ -0.51
GPHN-207ENST00000555456 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
GPHN-207ENST00000555456 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
GPHN-207ENST00000555456 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
GPHN-207ENST00000555456 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
GPHN-207ENST00000555456 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
GPHN-207ENST00000555456 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
GPHN-207ENST00000555456 POTEHQ6S545 545 aa11.61□□□□□ -0.55
GPHN-207ENST00000555456 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
GPHN-207ENST00000555456 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
GPHN-207ENST00000555456 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
GPHN-207ENST00000555456 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
GPHN-207ENST00000555456 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
GPHN-207ENST00000555456 MIER1Q8N108 512 aa11.52□□□□□ -0.57
GPHN-207ENST00000555456 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
GPHN-207ENST00000555456 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
GPHN-207ENST00000555456 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
GPHN-207ENST00000555456 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
GPHN-207ENST00000555456 IFNLR1Q8IU57 520 aaPredicted RBP11.39□□□□□ -0.59
GPHN-207ENST00000555456 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
GPHN-207ENST00000555456 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
GPHN-207ENST00000555456 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
GPHN-207ENST00000555456 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
GPHN-207ENST00000555456 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
GPHN-207ENST00000555456 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
GPHN-207ENST00000555456 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
GPHN-207ENST00000555456 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
GPHN-207ENST00000555456 NUBP1P53384 320 aa11.16□□□□□ -0.62
GPHN-207ENST00000555456 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
GPHN-207ENST00000555456 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
GPHN-207ENST00000555456 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
GPHN-207ENST00000555456 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
GPHN-207ENST00000555456 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
GPHN-207ENST00000555456 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
GPHN-207ENST00000555456 GSE1Q14687 1217 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms