RNA–Protein interactions for RNA: ENST00000554666.5

PAPOLA-209, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-209ENST00000554666 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
PAPOLA-209ENST00000554666 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
PAPOLA-209ENST00000554666 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
PAPOLA-209ENST00000554666 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
PAPOLA-209ENST00000554666 FOXD1Q16676 465 aa19.93■□□□□ 0.78
PAPOLA-209ENST00000554666 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
PAPOLA-209ENST00000554666 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
PAPOLA-209ENST00000554666 ADRA2BP18089 450 aa18.94■□□□□ 0.62
PAPOLA-209ENST00000554666 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
PAPOLA-209ENST00000554666 MSH5O43196 834 aa18.58■□□□□ 0.56
PAPOLA-209ENST00000554666 POTEDQ86YR6 584 aa18■□□□□ 0.47
PAPOLA-209ENST00000554666 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
PAPOLA-209ENST00000554666 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
PAPOLA-209ENST00000554666 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
PAPOLA-209ENST00000554666 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
PAPOLA-209ENST00000554666 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
PAPOLA-209ENST00000554666 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
PAPOLA-209ENST00000554666 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
PAPOLA-209ENST00000554666 KCNA4P22459 653 aa16.77■□□□□ 0.28
PAPOLA-209ENST00000554666 HOXD11P31277 338 aaPredicted RBP16.76■□□□□ 0.27
PAPOLA-209ENST00000554666 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
PAPOLA-209ENST00000554666 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
PAPOLA-209ENST00000554666 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
PAPOLA-209ENST00000554666 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
PAPOLA-209ENST00000554666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.149e-6■□□□□ 10.7
PAPOLA-209ENST00000554666 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
PAPOLA-209ENST00000554666 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
PAPOLA-209ENST00000554666 C1QBPQ07021 282 aaKnown RBP15.71■□□□□ 0.11
PAPOLA-209ENST00000554666 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
PAPOLA-209ENST00000554666 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
PAPOLA-209ENST00000554666 CACNB1Q02641 598 aaPredicted RBP15.55■□□□□ 0.08
PAPOLA-209ENST00000554666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
PAPOLA-209ENST00000554666 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
PAPOLA-209ENST00000554666 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
PAPOLA-209ENST00000554666 APLP2Q06481 763 aa15.42■□□□□ 0.06
PAPOLA-209ENST00000554666 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PAPOLA-209ENST00000554666 ZBTB22O15209 634 aa15.4■□□□□ 0.06
PAPOLA-209ENST00000554666 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
PAPOLA-209ENST00000554666 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
PAPOLA-209ENST00000554666 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
PAPOLA-209ENST00000554666 CAPN15O75808 1086 aa15.16■□□□□ 0.02
PAPOLA-209ENST00000554666 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
PAPOLA-209ENST00000554666 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
PAPOLA-209ENST00000554666 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
PAPOLA-209ENST00000554666 DSG3P32926 999 aa14.99□□□□□ -0.01
PAPOLA-209ENST00000554666 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
PAPOLA-209ENST00000554666 ABCB7O75027 752 aa14.8□□□□□ -0.04
PAPOLA-209ENST00000554666 POLA2Q14181 598 aa14.76□□□□□ -0.05
PAPOLA-209ENST00000554666 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
PAPOLA-209ENST00000554666 FBLN2P98095 1184 aa14.47□□□□□ -0.09
PAPOLA-209ENST00000554666 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
PAPOLA-209ENST00000554666 MKRN4PQ13434 485 aaPredicted RBP14.32□□□□□ -0.12
PAPOLA-209ENST00000554666 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
PAPOLA-209ENST00000554666 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
PAPOLA-209ENST00000554666 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
PAPOLA-209ENST00000554666 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
PAPOLA-209ENST00000554666 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
PAPOLA-209ENST00000554666 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
PAPOLA-209ENST00000554666 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
PAPOLA-209ENST00000554666 POTEHQ6S545 545 aa14.03□□□□□ -0.16
PAPOLA-209ENST00000554666 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
PAPOLA-209ENST00000554666 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
PAPOLA-209ENST00000554666 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
PAPOLA-209ENST00000554666 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
PAPOLA-209ENST00000554666 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
PAPOLA-209ENST00000554666 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PAPOLA-209ENST00000554666 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
PAPOLA-209ENST00000554666 FKBP8Q14318 412 aa13.73□□□□□ -0.21
PAPOLA-209ENST00000554666 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
PAPOLA-209ENST00000554666 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
PAPOLA-209ENST00000554666 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
PAPOLA-209ENST00000554666 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
PAPOLA-209ENST00000554666 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
PAPOLA-209ENST00000554666 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
PAPOLA-209ENST00000554666 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
PAPOLA-209ENST00000554666 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
PAPOLA-209ENST00000554666 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PAPOLA-209ENST00000554666 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
PAPOLA-209ENST00000554666 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
PAPOLA-209ENST00000554666 MIER1Q8N108 512 aa13.22□□□□□ -0.29
PAPOLA-209ENST00000554666 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
PAPOLA-209ENST00000554666 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
PAPOLA-209ENST00000554666 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
PAPOLA-209ENST00000554666 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
PAPOLA-209ENST00000554666 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
PAPOLA-209ENST00000554666 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
PAPOLA-209ENST00000554666 HAX1O00165 279 aa13.13□□□□□ -0.31
PAPOLA-209ENST00000554666 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
PAPOLA-209ENST00000554666 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
PAPOLA-209ENST00000554666 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
PAPOLA-209ENST00000554666 CLCN6P51797 869 aa12.96□□□□□ -0.33
PAPOLA-209ENST00000554666 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
PAPOLA-209ENST00000554666 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
PAPOLA-209ENST00000554666 NUBP1P53384 320 aa12.93□□□□□ -0.34
PAPOLA-209ENST00000554666 EVX2Q03828 476 aa12.93□□□□□ -0.34
PAPOLA-209ENST00000554666 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
PAPOLA-209ENST00000554666 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
PAPOLA-209ENST00000554666 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
PAPOLA-209ENST00000554666 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PAPOLA-209ENST00000554666 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms