RNA–Protein interactions for RNA: ENST00000554512.1

KLHDC1-203, Transcript of kelch domain containing 1, humanhuman

TSL 5

Gene KLHDC1, Length 726 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1-203ENST00000554512 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
KLHDC1-203ENST00000554512 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
KLHDC1-203ENST00000554512 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
KLHDC1-203ENST00000554512 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
KLHDC1-203ENST00000554512 FOXD1Q16676 465 aa18■□□□□ 0.47
KLHDC1-203ENST00000554512 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
KLHDC1-203ENST00000554512 MSH5O43196 834 aa17.19■□□□□ 0.34
KLHDC1-203ENST00000554512 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
KLHDC1-203ENST00000554512 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
KLHDC1-203ENST00000554512 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
KLHDC1-203ENST00000554512 ADRA2BP18089 450 aa16.18■□□□□ 0.18
KLHDC1-203ENST00000554512 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
KLHDC1-203ENST00000554512 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
KLHDC1-203ENST00000554512 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
KLHDC1-203ENST00000554512 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
KLHDC1-203ENST00000554512 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
KLHDC1-203ENST00000554512 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
KLHDC1-203ENST00000554512 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
KLHDC1-203ENST00000554512 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
KLHDC1-203ENST00000554512 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
KLHDC1-203ENST00000554512 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
KLHDC1-203ENST00000554512 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
KLHDC1-203ENST00000554512 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
KLHDC1-203ENST00000554512 POTEHQ6S545 545 aa13.91□□□□□ -0.18
KLHDC1-203ENST00000554512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.22
KLHDC1-203ENST00000554512 DSG3P32926 999 aa13.4□□□□□ -0.26
KLHDC1-203ENST00000554512 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
KLHDC1-203ENST00000554512 CAPN15O75808 1086 aa13.31□□□□□ -0.28
KLHDC1-203ENST00000554512 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
KLHDC1-203ENST00000554512 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
KLHDC1-203ENST00000554512 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
KLHDC1-203ENST00000554512 APLP2Q06481 763 aa12.93□□□□□ -0.34
KLHDC1-203ENST00000554512 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
KLHDC1-203ENST00000554512 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
KLHDC1-203ENST00000554512 ABCB7O75027 752 aa12.9□□□□□ -0.34
KLHDC1-203ENST00000554512 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
KLHDC1-203ENST00000554512 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
KLHDC1-203ENST00000554512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
KLHDC1-203ENST00000554512 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
KLHDC1-203ENST00000554512 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
KLHDC1-203ENST00000554512 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
KLHDC1-203ENST00000554512 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
KLHDC1-203ENST00000554512 POLA2Q14181 598 aa12.41□□□□□ -0.42
KLHDC1-203ENST00000554512 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
KLHDC1-203ENST00000554512 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
KLHDC1-203ENST00000554512 HAX1O00165 279 aa12.32□□□□□ -0.44
KLHDC1-203ENST00000554512 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
KLHDC1-203ENST00000554512 KCNA4P22459 653 aa12.22□□□□□ -0.45
KLHDC1-203ENST00000554512 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
KLHDC1-203ENST00000554512 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
KLHDC1-203ENST00000554512 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
KLHDC1-203ENST00000554512 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
KLHDC1-203ENST00000554512 EVX2Q03828 476 aa12.05□□□□□ -0.48
KLHDC1-203ENST00000554512 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
KLHDC1-203ENST00000554512 LHX8Q68G74 356 aa11.91□□□□□ -0.5
KLHDC1-203ENST00000554512 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
KLHDC1-203ENST00000554512 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
KLHDC1-203ENST00000554512 GABBR2O75899 941 aa11.8□□□□□ -0.52
KLHDC1-203ENST00000554512 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
KLHDC1-203ENST00000554512 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
KLHDC1-203ENST00000554512 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
KLHDC1-203ENST00000554512 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
KLHDC1-203ENST00000554512 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
KLHDC1-203ENST00000554512 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
KLHDC1-203ENST00000554512 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
KLHDC1-203ENST00000554512 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
KLHDC1-203ENST00000554512 FBLN2P98095 1184 aa11.56□□□□□ -0.56
KLHDC1-203ENST00000554512 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
KLHDC1-203ENST00000554512 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
KLHDC1-203ENST00000554512 CLCN6P51797 869 aa11.47□□□□□ -0.57
KLHDC1-203ENST00000554512 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
KLHDC1-203ENST00000554512 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
KLHDC1-203ENST00000554512 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
KLHDC1-203ENST00000554512 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
KLHDC1-203ENST00000554512 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
KLHDC1-203ENST00000554512 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
KLHDC1-203ENST00000554512 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
KLHDC1-203ENST00000554512 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
KLHDC1-203ENST00000554512 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
KLHDC1-203ENST00000554512 POTEMA6NI47 508 aa11.25□□□□□ -0.61
KLHDC1-203ENST00000554512 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
KLHDC1-203ENST00000554512 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
KLHDC1-203ENST00000554512 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
KLHDC1-203ENST00000554512 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
KLHDC1-203ENST00000554512 ZBTB22O15209 634 aa11.19□□□□□ -0.62
KLHDC1-203ENST00000554512 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
KLHDC1-203ENST00000554512 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
KLHDC1-203ENST00000554512 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
KLHDC1-203ENST00000554512 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
KLHDC1-203ENST00000554512 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
KLHDC1-203ENST00000554512 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
KLHDC1-203ENST00000554512 MAMSTRQ6ZN01 415 aa10.91□□□□□ -0.66
KLHDC1-203ENST00000554512 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
KLHDC1-203ENST00000554512 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
KLHDC1-203ENST00000554512 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
KLHDC1-203ENST00000554512 C7P10643 843 aa10.85□□□□□ -0.67
KLHDC1-203ENST00000554512 LCE2DQ5TA82 110 aaPredicted RBP10.85□□□□□ -0.67
KLHDC1-203ENST00000554512 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
KLHDC1-203ENST00000554512 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
KLHDC1-203ENST00000554512 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms