RNA–Protein interactions for RNA: ENST00000554184.5

CCNB1IP1-210, Transcript of cyclin B1 interacting protein 1, human

TSL 3

Gene CCNB1IP1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB1IP1-210	ENST00000554184	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.17	■□□□□ 0.82
CCNB1IP1-210	ENST00000554184	CHIC1	Q5VXU3	224 aa		18.74	■□□□□ 0.59
CCNB1IP1-210	ENST00000554184	SENP3	Q9H4L4	574 aa	Predicted RBP	17.18	■□□□□ 0.34
CCNB1IP1-210	ENST00000554184	PHF23	Q9BUL5	403 aa	Predicted RBP	16.93	■□□□□ 0.3
CCNB1IP1-210	ENST00000554184	FOXD1	Q16676	465 aa		16.16	■□□□□ 0.18
CCNB1IP1-210	ENST00000554184	POTED	Q86YR6	584 aa		15.95	■□□□□ 0.14
CCNB1IP1-210	ENST00000554184	PLPPR3	Q6T4P5	718 aa		15.27	■□□□□ 0.04
CCNB1IP1-210	ENST00000554184	MSH5	O43196	834 aa		15.25	■□□□□ 0.03
CCNB1IP1-210	ENST00000554184	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.96	□□□□□ -0.01
CCNB1IP1-210	ENST00000554184	PPP6R1	Q9UPN7	881 aa		14.71	□□□□□ -0.05
CCNB1IP1-210	ENST00000554184	ADRA2B	P18089	450 aa		14.63	□□□□□ -0.07
CCNB1IP1-210	ENST00000554184	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.63	□□□□□ -0.23
CCNB1IP1-210	ENST00000554184	DMRT2	Q9Y5R5	561 aa		13.55	□□□□□ -0.24
CCNB1IP1-210	ENST00000554184	CACNB1	Q02641	598 aa	Predicted RBP	13.51	□□□□□ -0.25
CCNB1IP1-210	ENST00000554184	PPP4R3CP	Q6ZMV5	832 aa		13.47	□□□□□ -0.25
CCNB1IP1-210	ENST00000554184	KCNA4	P22459	653 aa		13.29	□□□□□ -0.28
CCNB1IP1-210	ENST00000554184	SCAF1	Q9H7N4	1312 aa	Known RBP	13.27	□□□□□ -0.29
CCNB1IP1-210	ENST00000554184	NCBP3	Q53F19	620 aa	Known RBP	13.15	□□□□□ -0.3
CCNB1IP1-210	ENST00000554184	DCAF8L1	A6NGE4	600 aa		13.12	□□□□□ -0.31
CCNB1IP1-210	ENST00000554184	CNKSR2	Q8WXI2	1034 aa		13.06	□□□□□ -0.32
CCNB1IP1-210	ENST00000554184	RNF39	Q9H2S5	420 aa		13.01	□□□□□ -0.33
CCNB1IP1-210	ENST00000554184	NPM3	O75607	178 aa	Known RBP	12.97	□□□□□ -0.33
CCNB1IP1-210	ENST00000554184	HOXD11	P31277	338 aa	Predicted RBP	12.81	□□□□□ -0.36
CCNB1IP1-210	ENST00000554184	RNF216	Q9NWF9	866 aa	Predicted RBP	12.79	□□□□□ -0.36
CCNB1IP1-210	ENST00000554184	C1QBP	Q07021	282 aa	Known RBP	12.73	□□□□□ -0.37
CCNB1IP1-210	ENST00000554184	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.68	□□□□□ -0.38
CCNB1IP1-210	ENST00000554184	DNAJC5B	Q9UF47	199 aa		12.61	□□□□□ -0.39
CCNB1IP1-210	ENST00000554184	EHMT2	Q96KQ7	1210 aa		12.54	□□□□□ -0.4
CCNB1IP1-210	ENST00000554184	POTEH	Q6S545	545 aa		12.37	□□□□□ -0.43
CCNB1IP1-210	ENST00000554184	CSRNP3	Q8WYN3	585 aa		12.28	□□□□□ -0.44
CCNB1IP1-210	ENST00000554184	ZBTB22	O15209	634 aa		12.25	□□□□□ -0.45
CCNB1IP1-210	ENST00000554184	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.25	□□□□□ -0.45
CCNB1IP1-210	ENST00000554184	SLC4A2	P04920	1241 aa		12.22	□□□□□ -0.45
CCNB1IP1-210	ENST00000554184	FOXD4L1	Q9NU39	408 aa		12.2	□□□□□ -0.46
CCNB1IP1-210	ENST00000554184	DSG3	P32926	999 aa		12	□□□□□ -0.49
CCNB1IP1-210	ENST00000554184	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12	□□□□□ -0.49
CCNB1IP1-210	ENST00000554184	CAPN15	O75808	1086 aa		11.96	□□□□□ -0.49
CCNB1IP1-210	ENST00000554184	MYCN	P04198	464 aa	Predicted RBP	11.96	□□□□□ -0.49
CCNB1IP1-210	ENST00000554184		U3KPZ7	1027 aa	Predicted RBP	11.95	□□□□□ -0.5
CCNB1IP1-210	ENST00000554184	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.8	□□□□□ -0.52
CCNB1IP1-210	ENST00000554184	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.8	□□□□□ -0.52
CCNB1IP1-210	ENST00000554184	ATXN8OS	P0DMR3	200 aa		11.78	□□□□□ -0.52
CCNB1IP1-210	ENST00000554184	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.77	□□□□□ -0.53
CCNB1IP1-210	ENST00000554184	ABCB7	O75027	752 aa		11.69	□□□□□ -0.54
CCNB1IP1-210	ENST00000554184	TRH	P20396	242 aa	Predicted RBP	11.65	□□□□□ -0.54
CCNB1IP1-210	ENST00000554184	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.65	□□□□□ -0.54
CCNB1IP1-210	ENST00000554184	APLP2	Q06481	763 aa		11.64	□□□□□ -0.55
CCNB1IP1-210	ENST00000554184	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.52	□□□□□ -0.57
CCNB1IP1-210	ENST00000554184	CHRDL2	Q6WN34	429 aa		11.44	□□□□□ -0.58
CCNB1IP1-210	ENST00000554184	RBM42	Q9BTD8	480 aa	Known RBP	11.39	□□□□□ -0.59
CCNB1IP1-210	ENST00000554184	SP7	Q8TDD2	431 aa	Predicted RBP	11.32	□□□□□ -0.6
CCNB1IP1-210	ENST00000554184	POLA2	Q14181	598 aa		11.31	□□□□□ -0.6
CCNB1IP1-210	ENST00000554184	MKRN4P	Q13434	485 aa	Predicted RBP	11.16	□□□□□ -0.62
CCNB1IP1-210	ENST00000554184	FBLN2	P98095	1184 aa		11.13	□□□□□ -0.63
CCNB1IP1-210	ENST00000554184	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.13	□□□□□ -0.63
CCNB1IP1-210	ENST00000554184	FKBP8	Q14318	412 aa		11.07	□□□□□ -0.64
CCNB1IP1-210	ENST00000554184	PIP4P2	Q8N4L2	257 aa		11.07	□□□□□ -0.64
CCNB1IP1-210	ENST00000554184	AKT1S1	Q96B36	256 aa		11.03	□□□□□ -0.64
CCNB1IP1-210	ENST00000554184	HAX1	O00165	279 aa		11.02	□□□□□ -0.65
CCNB1IP1-210	ENST00000554184	REM2	Q8IYK8	340 aa	Predicted RBP	10.98	□□□□□ -0.65
CCNB1IP1-210	ENST00000554184	SPDYE4	A6NLX3	237 aa		10.95	□□□□□ -0.66
CCNB1IP1-210	ENST00000554184	OSCAR	Q8IYS5	282 aa		10.91	□□□□□ -0.66
CCNB1IP1-210	ENST00000554184	PITPNM1	O00562	1244 aa		10.9	□□□□□ -0.66
CCNB1IP1-210	ENST00000554184	EVX2	Q03828	476 aa		10.9	□□□□□ -0.66
CCNB1IP1-210	ENST00000554184	FXR2	P51116	673 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
CCNB1IP1-210	ENST00000554184	SPDYE2B	A6NHP3	402 aa		10.84	□□□□□ -0.67
CCNB1IP1-210	ENST00000554184	SPDYE6	P0CI01	402 aa		10.84	□□□□□ -0.67
CCNB1IP1-210	ENST00000554184	SPDYE2	Q495Y8	402 aa		10.84	□□□□□ -0.67
CCNB1IP1-210	ENST00000554184	PROM2	Q8N271	834 aa		10.82	□□□□□ -0.68
CCNB1IP1-210	ENST00000554184	ZNF692	Q9BU19	519 aa	Predicted RBP	10.82	□□□□□ -0.68
CCNB1IP1-210	ENST00000554184	SSUH2	Q9Y2M2	353 aa		10.78	□□□□□ -0.68
CCNB1IP1-210	ENST00000554184	RTN4	Q9NQC3	1192 aa	Known RBP	10.69	□□□□□ -0.7
CCNB1IP1-210	ENST00000554184	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
CCNB1IP1-210	ENST00000554184	FBXO3	Q9UK99	471 aa		10.66	□□□□□ -0.7
CCNB1IP1-210	ENST00000554184	LHX8	Q68G74	356 aa		10.62	□□□□□ -0.71
CCNB1IP1-210	ENST00000554184	PRKAR2A	P13861	404 aa	Known RBP	10.6	□□□□□ -0.71
CCNB1IP1-210	ENST00000554184	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.58	□□□□□ -0.72
CCNB1IP1-210	ENST00000554184	GABBR2	O75899	941 aa		10.56	□□□□□ -0.72
CCNB1IP1-210	ENST00000554184	C19orf67	A6NJJ6	358 aa		10.54	□□□□□ -0.72
CCNB1IP1-210	ENST00000554184	STAG3	Q9UJ98	1225 aa		10.53	□□□□□ -0.72
CCNB1IP1-210	ENST00000554184	CLEC11A	Q9Y240	323 aa		10.52	□□□□□ -0.73
CCNB1IP1-210	ENST00000554184	VASP	P50552	380 aa	Predicted RBP	10.5	□□□□□ -0.73
CCNB1IP1-210	ENST00000554184	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.49	□□□□□ -0.73
CCNB1IP1-210	ENST00000554184	PLSCR2	Q9NRY7	297 aa		10.49	□□□□□ -0.73
CCNB1IP1-210	ENST00000554184	CHADL	Q6NUI6	762 aa		10.42	□□□□□ -0.74
CCNB1IP1-210	ENST00000554184	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.39	□□□□□ -0.75
CCNB1IP1-210	ENST00000554184	POTEI	P0CG38	1075 aa		10.37	□□□□□ -0.75
CCNB1IP1-210	ENST00000554184	MIER1	Q8N108	512 aa		10.37	□□□□□ -0.75
CCNB1IP1-210	ENST00000554184	PRR29	P0C7W0	189 aa		10.36	□□□□□ -0.75
CCNB1IP1-210	ENST00000554184	PLCD3	Q8N3E9	789 aa		10.35	□□□□□ -0.75
CCNB1IP1-210	ENST00000554184	PLEKHG5	O94827	1062 aa		10.28	□□□□□ -0.76
CCNB1IP1-210	ENST00000554184	KLHL34	Q8N239	644 aa		10.28	□□□□□ -0.76
CCNB1IP1-210	ENST00000554184	CREBZF	Q9NS37	354 aa		10.27	□□□□□ -0.77
CCNB1IP1-210	ENST00000554184	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.24	□□□□□ -0.77
CCNB1IP1-210	ENST00000554184	CD44	P16070	742 aa	Known RBP	10.23	□□□□□ -0.77
CCNB1IP1-210	ENST00000554184	SPOCK2	Q92563	424 aa		10.22	□□□□□ -0.77
CCNB1IP1-210	ENST00000554184	SLC24A1	O60721	1099 aa		10.2	□□□□□ -0.78
CCNB1IP1-210	ENST00000554184	MNX1	P50219	401 aa	Predicted RBP	10.2	□□□□□ -0.78
CCNB1IP1-210	ENST00000554184	DCBLD2	Q96PD2	775 aa		10.14	□□□□□ -0.79
CCNB1IP1-210	ENST00000554184	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.12	□□□□□ -0.79

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