RNA–Protein interactions for RNA: ENST00000552654.1

BRDT-221, Transcript of bromodomain testis associated, humanhuman

TSL 4

Gene BRDT, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRDT-221ENST00000552654 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
BRDT-221ENST00000552654 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
BRDT-221ENST00000552654 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
BRDT-221ENST00000552654 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
BRDT-221ENST00000552654 FOXD1Q16676 465 aa19.34■□□□□ 0.69
BRDT-221ENST00000552654 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
BRDT-221ENST00000552654 ADRA2BP18089 450 aa18.41■□□□□ 0.54
BRDT-221ENST00000552654 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
BRDT-221ENST00000552654 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
BRDT-221ENST00000552654 MSH5O43196 834 aa18■□□□□ 0.47
BRDT-221ENST00000552654 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
BRDT-221ENST00000552654 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
BRDT-221ENST00000552654 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
BRDT-221ENST00000552654 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
BRDT-221ENST00000552654 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
BRDT-221ENST00000552654 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
BRDT-221ENST00000552654 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
BRDT-221ENST00000552654 KCNA4P22459 653 aa16.22■□□□□ 0.19
BRDT-221ENST00000552654 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
BRDT-221ENST00000552654 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
BRDT-221ENST00000552654 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
BRDT-221ENST00000552654 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
BRDT-221ENST00000552654 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
BRDT-221ENST00000552654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
BRDT-221ENST00000552654 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
BRDT-221ENST00000552654 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
BRDT-221ENST00000552654 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
BRDT-221ENST00000552654 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
BRDT-221ENST00000552654 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
BRDT-221ENST00000552654 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
BRDT-221ENST00000552654 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
BRDT-221ENST00000552654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
BRDT-221ENST00000552654 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
BRDT-221ENST00000552654 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
BRDT-221ENST00000552654 APLP2Q06481 763 aa14.9□□□□□ -0.02
BRDT-221ENST00000552654 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
BRDT-221ENST00000552654 ZBTB22O15209 634 aa14.86□□□□□ -0.03
BRDT-221ENST00000552654 CAPN15O75808 1086 aa14.77□□□□□ -0.05
BRDT-221ENST00000552654 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
BRDT-221ENST00000552654 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
BRDT-221ENST00000552654 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
BRDT-221ENST00000552654 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
BRDT-221ENST00000552654 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
BRDT-221ENST00000552654 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
BRDT-221ENST00000552654 DSG3P32926 999 aa14.53□□□□□ -0.08
BRDT-221ENST00000552654 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
BRDT-221ENST00000552654 ABCB7O75027 752 aa14.42□□□□□ -0.1
BRDT-221ENST00000552654 POLA2Q14181 598 aa14.35□□□□□ -0.11
BRDT-221ENST00000552654 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
BRDT-221ENST00000552654 FBLN2P98095 1184 aa14.02□□□□□ -0.17
BRDT-221ENST00000552654 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
BRDT-221ENST00000552654 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
BRDT-221ENST00000552654 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
BRDT-221ENST00000552654 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
BRDT-221ENST00000552654 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
BRDT-221ENST00000552654 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
BRDT-221ENST00000552654 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
BRDT-221ENST00000552654 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
BRDT-221ENST00000552654 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
BRDT-221ENST00000552654 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
BRDT-221ENST00000552654 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
BRDT-221ENST00000552654 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
BRDT-221ENST00000552654 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
BRDT-221ENST00000552654 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
BRDT-221ENST00000552654 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
BRDT-221ENST00000552654 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
BRDT-221ENST00000552654 FKBP8Q14318 412 aa13.3□□□□□ -0.28
BRDT-221ENST00000552654 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
BRDT-221ENST00000552654 PROM2Q8N271 834 aa13.21□□□□□ -0.29
BRDT-221ENST00000552654 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
BRDT-221ENST00000552654 POTEHQ6S545 545 aa13.19□□□□□ -0.3
BRDT-221ENST00000552654 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
BRDT-221ENST00000552654 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
BRDT-221ENST00000552654 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
BRDT-221ENST00000552654 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
BRDT-221ENST00000552654 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
BRDT-221ENST00000552654 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
BRDT-221ENST00000552654 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
BRDT-221ENST00000552654 MIER1Q8N108 512 aa12.87□□□□□ -0.35
BRDT-221ENST00000552654 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
BRDT-221ENST00000552654 HAX1O00165 279 aa12.83□□□□□ -0.36
BRDT-221ENST00000552654 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
BRDT-221ENST00000552654 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRDT-221ENST00000552654 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
BRDT-221ENST00000552654 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
BRDT-221ENST00000552654 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
BRDT-221ENST00000552654 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
BRDT-221ENST00000552654 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
BRDT-221ENST00000552654 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
BRDT-221ENST00000552654 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
BRDT-221ENST00000552654 EVX2Q03828 476 aa12.6□□□□□ -0.39
BRDT-221ENST00000552654 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
BRDT-221ENST00000552654 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
BRDT-221ENST00000552654 NUBP1P53384 320 aa12.5□□□□□ -0.41
BRDT-221ENST00000552654 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
BRDT-221ENST00000552654 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
BRDT-221ENST00000552654 CLCN6P51797 869 aa12.49□□□□□ -0.41
BRDT-221ENST00000552654 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
BRDT-221ENST00000552654 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
BRDT-221ENST00000552654 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms