RNA–Protein interactions for RNA: ENST00000552155.5

ERGIC2-211, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-211ENST00000552155 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
ERGIC2-211ENST00000552155 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
ERGIC2-211ENST00000552155 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
ERGIC2-211ENST00000552155 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
ERGIC2-211ENST00000552155 FOXD1Q16676 465 aa22.66■■□□□ 1.22
ERGIC2-211ENST00000552155 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
ERGIC2-211ENST00000552155 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
ERGIC2-211ENST00000552155 ADRA2BP18089 450 aa21.64■■□□□ 1.05
ERGIC2-211ENST00000552155 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
ERGIC2-211ENST00000552155 MSH5O43196 834 aa20.94■□□□□ 0.94
ERGIC2-211ENST00000552155 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
ERGIC2-211ENST00000552155 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
ERGIC2-211ENST00000552155 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
ERGIC2-211ENST00000552155 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
ERGIC2-211ENST00000552155 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
ERGIC2-211ENST00000552155 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
ERGIC2-211ENST00000552155 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
ERGIC2-211ENST00000552155 KCNA4P22459 653 aa19.29■□□□□ 0.68
ERGIC2-211ENST00000552155 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
ERGIC2-211ENST00000552155 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
ERGIC2-211ENST00000552155 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
ERGIC2-211ENST00000552155 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
ERGIC2-211ENST00000552155 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
ERGIC2-211ENST00000552155 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
ERGIC2-211ENST00000552155 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
ERGIC2-211ENST00000552155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.481e-8■□□□□ 11.3
ERGIC2-211ENST00000552155 RNF39Q9H2S5 420 aa17.96■□□□□ 0.47
ERGIC2-211ENST00000552155 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
ERGIC2-211ENST00000552155 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
ERGIC2-211ENST00000552155 ZBTB22O15209 634 aa17.77■□□□□ 0.44
ERGIC2-211ENST00000552155 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
ERGIC2-211ENST00000552155 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
ERGIC2-211ENST00000552155 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
ERGIC2-211ENST00000552155 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
ERGIC2-211ENST00000552155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
ERGIC2-211ENST00000552155 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
ERGIC2-211ENST00000552155 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
ERGIC2-211ENST00000552155 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
ERGIC2-211ENST00000552155 APLP2Q06481 763 aa17.34■□□□□ 0.37
ERGIC2-211ENST00000552155 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
ERGIC2-211ENST00000552155 ATXN8OSP0DMR3 200 aa17.23■□□□□ 0.35
ERGIC2-211ENST00000552155 CAPN15O75808 1086 aa17.18■□□□□ 0.34
ERGIC2-211ENST00000552155 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
ERGIC2-211ENST00000552155 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
ERGIC2-211ENST00000552155 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
ERGIC2-211ENST00000552155 DSG3P32926 999 aa17.03■□□□□ 0.32
ERGIC2-211ENST00000552155 ABCB7O75027 752 aa16.85■□□□□ 0.29
ERGIC2-211ENST00000552155 POLA2Q14181 598 aa16.81■□□□□ 0.28
ERGIC2-211ENST00000552155 ZBTB12Q9Y330 459 aaPredicted RBP16.55■□□□□ 0.24
ERGIC2-211ENST00000552155 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
ERGIC2-211ENST00000552155 FBLN2P98095 1184 aa16.39■□□□□ 0.21
ERGIC2-211ENST00000552155 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
ERGIC2-211ENST00000552155 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
ERGIC2-211ENST00000552155 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
ERGIC2-211ENST00000552155 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
ERGIC2-211ENST00000552155 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
ERGIC2-211ENST00000552155 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
ERGIC2-211ENST00000552155 AKT1S1Q96B36 256 aa16■□□□□ 0.15
ERGIC2-211ENST00000552155 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
ERGIC2-211ENST00000552155 SPDYE4A6NLX3 237 aa15.94■□□□□ 0.14
ERGIC2-211ENST00000552155 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
ERGIC2-211ENST00000552155 FKBP8Q14318 412 aa15.8■□□□□ 0.12
ERGIC2-211ENST00000552155 PROM2Q8N271 834 aa15.79■□□□□ 0.12
ERGIC2-211ENST00000552155 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
ERGIC2-211ENST00000552155 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
ERGIC2-211ENST00000552155 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
ERGIC2-211ENST00000552155 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
ERGIC2-211ENST00000552155 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
ERGIC2-211ENST00000552155 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
ERGIC2-211ENST00000552155 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
ERGIC2-211ENST00000552155 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
ERGIC2-211ENST00000552155 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
ERGIC2-211ENST00000552155 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
ERGIC2-211ENST00000552155 POTEHQ6S545 545 aa15.24■□□□□ 0.03
ERGIC2-211ENST00000552155 CREBZFQ9NS37 354 aa15.23■□□□□ 0.03
ERGIC2-211ENST00000552155 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
ERGIC2-211ENST00000552155 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
ERGIC2-211ENST00000552155 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
ERGIC2-211ENST00000552155 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
ERGIC2-211ENST00000552155 MIER1Q8N108 512 aa15.08■□□□□ 0
ERGIC2-211ENST00000552155 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
ERGIC2-211ENST00000552155 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
ERGIC2-211ENST00000552155 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
ERGIC2-211ENST00000552155 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
ERGIC2-211ENST00000552155 IFNLR1Q8IU57 520 aaPredicted RBP14.92□□□□□ -0.02
ERGIC2-211ENST00000552155 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
ERGIC2-211ENST00000552155 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
ERGIC2-211ENST00000552155 HAX1O00165 279 aa14.83□□□□□ -0.04
ERGIC2-211ENST00000552155 NUBP1P53384 320 aa14.81□□□□□ -0.04
ERGIC2-211ENST00000552155 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
ERGIC2-211ENST00000552155 EVX2Q03828 476 aa14.78□□□□□ -0.04
ERGIC2-211ENST00000552155 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
ERGIC2-211ENST00000552155 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
ERGIC2-211ENST00000552155 SPOCK2Q92563 424 aa14.73□□□□□ -0.05
ERGIC2-211ENST00000552155 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
ERGIC2-211ENST00000552155 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
ERGIC2-211ENST00000552155 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
ERGIC2-211ENST00000552155 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
ERGIC2-211ENST00000552155 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
ERGIC2-211ENST00000552155 FAM212AQ96EL1 285 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms