RNA–Protein interactions for RNA: ENST00000552074.5

SYT1-210, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-210ENST00000552074 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
SYT1-210ENST00000552074 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
SYT1-210ENST00000552074 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
SYT1-210ENST00000552074 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
SYT1-210ENST00000552074 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
SYT1-210ENST00000552074 FOXD1Q16676 465 aa19.63■□□□□ 0.73
SYT1-210ENST00000552074 MSH5O43196 834 aa18.49■□□□□ 0.55
SYT1-210ENST00000552074 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
SYT1-210ENST00000552074 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
SYT1-210ENST00000552074 ADRA2BP18089 450 aa17.66■□□□□ 0.42
SYT1-210ENST00000552074 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
SYT1-210ENST00000552074 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
SYT1-210ENST00000552074 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
SYT1-210ENST00000552074 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
SYT1-210ENST00000552074 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
SYT1-210ENST00000552074 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
SYT1-210ENST00000552074 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
SYT1-210ENST00000552074 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
SYT1-210ENST00000552074 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
SYT1-210ENST00000552074 POTEHQ6S545 545 aa15.18■□□□□ 0.02
SYT1-210ENST00000552074 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
SYT1-210ENST00000552074 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
SYT1-210ENST00000552074 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
SYT1-210ENST00000552074 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
SYT1-210ENST00000552074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
SYT1-210ENST00000552074 DSG3P32926 999 aa14.56□□□□□ -0.08
SYT1-210ENST00000552074 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
SYT1-210ENST00000552074 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
SYT1-210ENST00000552074 CAPN15O75808 1086 aa14.38□□□□□ -0.11
SYT1-210ENST00000552074 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
SYT1-210ENST00000552074 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
SYT1-210ENST00000552074 ABCB7O75027 752 aa14.06□□□□□ -0.16
SYT1-210ENST00000552074 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
SYT1-210ENST00000552074 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
SYT1-210ENST00000552074 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
SYT1-210ENST00000552074 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
SYT1-210ENST00000552074 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
SYT1-210ENST00000552074 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
SYT1-210ENST00000552074 APLP2Q06481 763 aa13.6□□□□□ -0.23
SYT1-210ENST00000552074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
SYT1-210ENST00000552074 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
SYT1-210ENST00000552074 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
SYT1-210ENST00000552074 POLA2Q14181 598 aa13.42□□□□□ -0.26
SYT1-210ENST00000552074 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
SYT1-210ENST00000552074 HAX1O00165 279 aa13.35□□□□□ -0.27
SYT1-210ENST00000552074 EVX2Q03828 476 aa13.33□□□□□ -0.28
SYT1-210ENST00000552074 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
SYT1-210ENST00000552074 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
SYT1-210ENST00000552074 KCNA4P22459 653 aa13.2□□□□□ -0.3
SYT1-210ENST00000552074 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
SYT1-210ENST00000552074 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
SYT1-210ENST00000552074 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
SYT1-210ENST00000552074 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
SYT1-210ENST00000552074 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
SYT1-210ENST00000552074 LHX8Q68G74 356 aa12.96□□□□□ -0.33
SYT1-210ENST00000552074 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
SYT1-210ENST00000552074 GABBR2O75899 941 aa12.84□□□□□ -0.35
SYT1-210ENST00000552074 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
SYT1-210ENST00000552074 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
SYT1-210ENST00000552074 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
SYT1-210ENST00000552074 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
SYT1-210ENST00000552074 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
SYT1-210ENST00000552074 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
SYT1-210ENST00000552074 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
SYT1-210ENST00000552074 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
SYT1-210ENST00000552074 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
SYT1-210ENST00000552074 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
SYT1-210ENST00000552074 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
SYT1-210ENST00000552074 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
SYT1-210ENST00000552074 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
SYT1-210ENST00000552074 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
SYT1-210ENST00000552074 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
SYT1-210ENST00000552074 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
SYT1-210ENST00000552074 FBLN2P98095 1184 aa12.27□□□□□ -0.45
SYT1-210ENST00000552074 POTEMA6NI47 508 aa12.25□□□□□ -0.45
SYT1-210ENST00000552074 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
SYT1-210ENST00000552074 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
SYT1-210ENST00000552074 ZBTB22O15209 634 aa12.2□□□□□ -0.46
SYT1-210ENST00000552074 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
SYT1-210ENST00000552074 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
SYT1-210ENST00000552074 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
SYT1-210ENST00000552074 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
SYT1-210ENST00000552074 CLCN6P51797 869 aa12.1□□□□□ -0.47
SYT1-210ENST00000552074 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYT1-210ENST00000552074 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
SYT1-210ENST00000552074 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
SYT1-210ENST00000552074 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
SYT1-210ENST00000552074 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
SYT1-210ENST00000552074 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
SYT1-210ENST00000552074 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
SYT1-210ENST00000552074 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
SYT1-210ENST00000552074 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
SYT1-210ENST00000552074 PHF12Q96QT6 1004 aa11.84□□□□□ -0.51
SYT1-210ENST00000552074 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
SYT1-210ENST00000552074 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
SYT1-210ENST00000552074 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
SYT1-210ENST00000552074 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
SYT1-210ENST00000552074 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
SYT1-210ENST00000552074 C7P10643 843 aa11.63□□□□□ -0.55
SYT1-210ENST00000552074 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms