RNA–Protein interactions for RNA: ENST00000551789.1

TWF1-210, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 2

Gene TWF1, Length 617 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-210ENST00000551789 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
TWF1-210ENST00000551789 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
TWF1-210ENST00000551789 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
TWF1-210ENST00000551789 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
TWF1-210ENST00000551789 FOXD1Q16676 465 aa21.13■□□□□ 0.97
TWF1-210ENST00000551789 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
TWF1-210ENST00000551789 MSH5O43196 834 aa20■□□□□ 0.79
TWF1-210ENST00000551789 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
TWF1-210ENST00000551789 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
TWF1-210ENST00000551789 ADRA2BP18089 450 aa19.08■□□□□ 0.64
TWF1-210ENST00000551789 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
TWF1-210ENST00000551789 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
TWF1-210ENST00000551789 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
TWF1-210ENST00000551789 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
TWF1-210ENST00000551789 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
TWF1-210ENST00000551789 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
TWF1-210ENST00000551789 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
TWF1-210ENST00000551789 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
TWF1-210ENST00000551789 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
TWF1-210ENST00000551789 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
TWF1-210ENST00000551789 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
TWF1-210ENST00000551789 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
TWF1-210ENST00000551789 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
TWF1-210ENST00000551789 POTEHQ6S545 545 aa16.12■□□□□ 0.17
TWF1-210ENST00000551789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
TWF1-210ENST00000551789 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
TWF1-210ENST00000551789 DSG3P32926 999 aa15.71■□□□□ 0.11
TWF1-210ENST00000551789 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
TWF1-210ENST00000551789 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
TWF1-210ENST00000551789 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
TWF1-210ENST00000551789 KCNA4P22459 653 aa15.61■□□□□ 0.09
TWF1-210ENST00000551789 CAPN15O75808 1086 aa15.56■□□□□ 0.08
TWF1-210ENST00000551789 ABCB7O75027 752 aa15.17■□□□□ 0.02
TWF1-210ENST00000551789 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
TWF1-210ENST00000551789 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
TWF1-210ENST00000551789 SLC4A2P04920 1241 aa15.08■□□□□ 0
TWF1-210ENST00000551789 APLP2Q06481 763 aa15.02■□□□□ -0
TWF1-210ENST00000551789 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
TWF1-210ENST00000551789 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
TWF1-210ENST00000551789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
TWF1-210ENST00000551789 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
TWF1-210ENST00000551789 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
TWF1-210ENST00000551789 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
TWF1-210ENST00000551789 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
TWF1-210ENST00000551789 POLA2Q14181 598 aa14.6□□□□□ -0.07
TWF1-210ENST00000551789 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
TWF1-210ENST00000551789 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
TWF1-210ENST00000551789 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
TWF1-210ENST00000551789 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
TWF1-210ENST00000551789 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
TWF1-210ENST00000551789 ZBTB22O15209 634 aa14.35□□□□□ -0.11
TWF1-210ENST00000551789 HAX1O00165 279 aa14.31□□□□□ -0.12
TWF1-210ENST00000551789 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
TWF1-210ENST00000551789 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
TWF1-210ENST00000551789 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
TWF1-210ENST00000551789 EVX2Q03828 476 aa14.18□□□□□ -0.14
TWF1-210ENST00000551789 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
TWF1-210ENST00000551789 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
TWF1-210ENST00000551789 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
TWF1-210ENST00000551789 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
TWF1-210ENST00000551789 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
TWF1-210ENST00000551789 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
TWF1-210ENST00000551789 LHX8Q68G74 356 aa13.83□□□□□ -0.2
TWF1-210ENST00000551789 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
TWF1-210ENST00000551789 GABBR2O75899 941 aa13.78□□□□□ -0.2
TWF1-210ENST00000551789 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
TWF1-210ENST00000551789 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
TWF1-210ENST00000551789 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
TWF1-210ENST00000551789 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
TWF1-210ENST00000551789 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
TWF1-210ENST00000551789 FBLN2P98095 1184 aa13.6□□□□□ -0.23
TWF1-210ENST00000551789 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
TWF1-210ENST00000551789 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
TWF1-210ENST00000551789 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
TWF1-210ENST00000551789 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
TWF1-210ENST00000551789 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
TWF1-210ENST00000551789 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
TWF1-210ENST00000551789 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
TWF1-210ENST00000551789 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
TWF1-210ENST00000551789 CLCN6P51797 869 aa13.28□□□□□ -0.28
TWF1-210ENST00000551789 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
TWF1-210ENST00000551789 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
TWF1-210ENST00000551789 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
TWF1-210ENST00000551789 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
TWF1-210ENST00000551789 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
TWF1-210ENST00000551789 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
TWF1-210ENST00000551789 POTEMA6NI47 508 aa13.06□□□□□ -0.32
TWF1-210ENST00000551789 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
TWF1-210ENST00000551789 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
TWF1-210ENST00000551789 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
TWF1-210ENST00000551789 POTEGQ6S5H5 508 aa13□□□□□ -0.33
TWF1-210ENST00000551789 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
TWF1-210ENST00000551789 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
TWF1-210ENST00000551789 PCDH10Q9P2E7 1040 aa12.86□□□□□ -0.35
TWF1-210ENST00000551789 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
TWF1-210ENST00000551789 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
TWF1-210ENST00000551789 PROM2Q8N271 834 aa12.79□□□□□ -0.36
TWF1-210ENST00000551789 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
TWF1-210ENST00000551789 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
TWF1-210ENST00000551789 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms