RNA–Protein interactions for RNA: ENST00000549790.1

EEA1-204, Transcript of early endosome antigen 1, humanhuman

TSL 4

Gene EEA1, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-204ENST00000549790 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
EEA1-204ENST00000549790 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
EEA1-204ENST00000549790 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
EEA1-204ENST00000549790 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
EEA1-204ENST00000549790 FOXD1Q16676 465 aa18.8■□□□□ 0.6
EEA1-204ENST00000549790 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
EEA1-204ENST00000549790 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
EEA1-204ENST00000549790 ADRA2BP18089 450 aa17.95■□□□□ 0.46
EEA1-204ENST00000549790 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
EEA1-204ENST00000549790 MSH5O43196 834 aa17.33■□□□□ 0.36
EEA1-204ENST00000549790 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
EEA1-204ENST00000549790 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
EEA1-204ENST00000549790 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
EEA1-204ENST00000549790 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
EEA1-204ENST00000549790 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
EEA1-204ENST00000549790 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
EEA1-204ENST00000549790 KCNA4P22459 653 aa15.94■□□□□ 0.14
EEA1-204ENST00000549790 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
EEA1-204ENST00000549790 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
EEA1-204ENST00000549790 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
EEA1-204ENST00000549790 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
EEA1-204ENST00000549790 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
EEA1-204ENST00000549790 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
EEA1-204ENST00000549790 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
EEA1-204ENST00000549790 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
EEA1-204ENST00000549790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■■□□□ 14.4
EEA1-204ENST00000549790 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
EEA1-204ENST00000549790 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
EEA1-204ENST00000549790 ZBTB22O15209 634 aa14.71□□□□□ -0.05
EEA1-204ENST00000549790 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
EEA1-204ENST00000549790 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
EEA1-204ENST00000549790 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
EEA1-204ENST00000549790 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
EEA1-204ENST00000549790 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
EEA1-204ENST00000549790 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
EEA1-204ENST00000549790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
EEA1-204ENST00000549790 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
EEA1-204ENST00000549790 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
EEA1-204ENST00000549790 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
EEA1-204ENST00000549790 APLP2Q06481 763 aa14.28□□□□□ -0.12
EEA1-204ENST00000549790 CAPN15O75808 1086 aa14.25□□□□□ -0.13
EEA1-204ENST00000549790 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
EEA1-204ENST00000549790 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
EEA1-204ENST00000549790 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
EEA1-204ENST00000549790 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
EEA1-204ENST00000549790 DSG3P32926 999 aa14.12□□□□□ -0.15
EEA1-204ENST00000549790 ABCB7O75027 752 aa13.98□□□□□ -0.17
EEA1-204ENST00000549790 POLA2Q14181 598 aa13.93□□□□□ -0.18
EEA1-204ENST00000549790 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
EEA1-204ENST00000549790 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
EEA1-204ENST00000549790 FBLN2P98095 1184 aa13.52□□□□□ -0.25
EEA1-204ENST00000549790 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
EEA1-204ENST00000549790 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
EEA1-204ENST00000549790 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
EEA1-204ENST00000549790 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
EEA1-204ENST00000549790 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
EEA1-204ENST00000549790 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
EEA1-204ENST00000549790 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
EEA1-204ENST00000549790 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
EEA1-204ENST00000549790 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
EEA1-204ENST00000549790 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
EEA1-204ENST00000549790 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
EEA1-204ENST00000549790 FKBP8Q14318 412 aa13.04□□□□□ -0.32
EEA1-204ENST00000549790 PROM2Q8N271 834 aa13.01□□□□□ -0.33
EEA1-204ENST00000549790 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
EEA1-204ENST00000549790 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
EEA1-204ENST00000549790 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
EEA1-204ENST00000549790 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
EEA1-204ENST00000549790 POTEHQ6S545 545 aa12.79□□□□□ -0.36
EEA1-204ENST00000549790 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
EEA1-204ENST00000549790 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
EEA1-204ENST00000549790 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
EEA1-204ENST00000549790 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
EEA1-204ENST00000549790 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
EEA1-204ENST00000549790 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
EEA1-204ENST00000549790 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
EEA1-204ENST00000549790 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
EEA1-204ENST00000549790 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
EEA1-204ENST00000549790 MIER1Q8N108 512 aa12.47□□□□□ -0.41
EEA1-204ENST00000549790 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
EEA1-204ENST00000549790 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
EEA1-204ENST00000549790 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
EEA1-204ENST00000549790 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
EEA1-204ENST00000549790 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
EEA1-204ENST00000549790 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
EEA1-204ENST00000549790 HAX1O00165 279 aa12.31□□□□□ -0.44
EEA1-204ENST00000549790 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
EEA1-204ENST00000549790 EVX2Q03828 476 aa12.3□□□□□ -0.44
EEA1-204ENST00000549790 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
EEA1-204ENST00000549790 NUBP1P53384 320 aa12.25□□□□□ -0.45
EEA1-204ENST00000549790 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
EEA1-204ENST00000549790 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
EEA1-204ENST00000549790 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
EEA1-204ENST00000549790 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
EEA1-204ENST00000549790 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
EEA1-204ENST00000549790 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
EEA1-204ENST00000549790 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
EEA1-204ENST00000549790 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
EEA1-204ENST00000549790 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
EEA1-204ENST00000549790 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms