RNA–Protein interactions for RNA: ENST00000549355.1

PTPRQ-204, Transcript of protein tyrosine phosphatase, receptor type Q, humanhuman

TSL 4

Gene PTPRQ, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQ-204ENST00000549355 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
PTPRQ-204ENST00000549355 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
PTPRQ-204ENST00000549355 SENP3Q9H4L4 574 aaPredicted RBP27.96■■■□□ 2.07
PTPRQ-204ENST00000549355 PHF23Q9BUL5 403 aaPredicted RBP27.52■■■□□ 2
PTPRQ-204ENST00000549355 FOXD1Q16676 465 aa26.3■■□□□ 1.8
PTPRQ-204ENST00000549355 POTEDQ86YR6 584 aa26.04■■□□□ 1.76
PTPRQ-204ENST00000549355 MSH5O43196 834 aa24.85■■□□□ 1.57
PTPRQ-204ENST00000549355 PIAS4Q8N2W9 510 aaPredicted RBP24.2■■□□□ 1.46
PTPRQ-204ENST00000549355 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
PTPRQ-204ENST00000549355 ADRA2BP18089 450 aa23.67■■□□□ 1.38
PTPRQ-204ENST00000549355 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
PTPRQ-204ENST00000549355 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
PTPRQ-204ENST00000549355 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
PTPRQ-204ENST00000549355 CACNB1Q02641 598 aaPredicted RBP21.88■■□□□ 1.09
PTPRQ-204ENST00000549355 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
PTPRQ-204ENST00000549355 RNF39Q9H2S5 420 aa21.22■□□□□ 0.99
PTPRQ-204ENST00000549355 DCAF8L1A6NGE4 600 aa21.01■□□□□ 0.95
PTPRQ-204ENST00000549355 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
PTPRQ-204ENST00000549355 C1QBPQ07021 282 aaKnown RBP20.78■□□□□ 0.92
PTPRQ-204ENST00000549355 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
PTPRQ-204ENST00000549355 RNF216Q9NWF9 866 aaPredicted RBP20.45■□□□□ 0.86
PTPRQ-204ENST00000549355 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
PTPRQ-204ENST00000549355 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
PTPRQ-204ENST00000549355 POTEHQ6S545 545 aa20.16■□□□□ 0.82
PTPRQ-204ENST00000549355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPRQ-204ENST00000549355 DSG3P32926 999 aa19.54■□□□□ 0.72
PTPRQ-204ENST00000549355 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
PTPRQ-204ENST00000549355 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.69
PTPRQ-204ENST00000549355 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
PTPRQ-204ENST00000549355 CAPN15O75808 1086 aa19.25■□□□□ 0.67
PTPRQ-204ENST00000549355 NPM3O75607 178 aaKnown RBP19.21■□□□□ 0.67
PTPRQ-204ENST00000549355 ABCB7O75027 752 aa18.78■□□□□ 0.6
PTPRQ-204ENST00000549355 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
PTPRQ-204ENST00000549355 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
PTPRQ-204ENST00000549355 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
PTPRQ-204ENST00000549355 CHRDL2Q6WN34 429 aa18.57■□□□□ 0.56
PTPRQ-204ENST00000549355 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
PTPRQ-204ENST00000549355 APLP2Q06481 763 aa18.49■□□□□ 0.55
PTPRQ-204ENST00000549355 SP7Q8TDD2 431 aaPredicted RBP18.43■□□□□ 0.54
PTPRQ-204ENST00000549355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
PTPRQ-204ENST00000549355 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
PTPRQ-204ENST00000549355 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
PTPRQ-204ENST00000549355 POLA2Q14181 598 aa18.06■□□□□ 0.48
PTPRQ-204ENST00000549355 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
PTPRQ-204ENST00000549355 KCNA4P22459 653 aa17.96■□□□□ 0.47
PTPRQ-204ENST00000549355 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
PTPRQ-204ENST00000549355 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
PTPRQ-204ENST00000549355 HAX1O00165 279 aa17.78■□□□□ 0.44
PTPRQ-204ENST00000549355 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTPRQ-204ENST00000549355 EVX2Q03828 476 aa17.71■□□□□ 0.43
PTPRQ-204ENST00000549355 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
PTPRQ-204ENST00000549355 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
PTPRQ-204ENST00000549355 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
PTPRQ-204ENST00000549355 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
PTPRQ-204ENST00000549355 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
PTPRQ-204ENST00000549355 LHX8Q68G74 356 aa17.25■□□□□ 0.35
PTPRQ-204ENST00000549355 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
PTPRQ-204ENST00000549355 GABBR2O75899 941 aa17.16■□□□□ 0.34
PTPRQ-204ENST00000549355 PRKAR2AP13861 404 aaKnown RBP17.12■□□□□ 0.33
PTPRQ-204ENST00000549355 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
PTPRQ-204ENST00000549355 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
PTPRQ-204ENST00000549355 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
PTPRQ-204ENST00000549355 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
PTPRQ-204ENST00000549355 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
PTPRQ-204ENST00000549355 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
PTPRQ-204ENST00000549355 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
PTPRQ-204ENST00000549355 PLSCR2Q9NRY7 297 aa16.85■□□□□ 0.29
PTPRQ-204ENST00000549355 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
PTPRQ-204ENST00000549355 SSUH2Q9Y2M2 353 aa16.74■□□□□ 0.27
PTPRQ-204ENST00000549355 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
PTPRQ-204ENST00000549355 FBLN2P98095 1184 aa16.65■□□□□ 0.26
PTPRQ-204ENST00000549355 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
PTPRQ-204ENST00000549355 ZBTB22O15209 634 aa16.58■□□□□ 0.24
PTPRQ-204ENST00000549355 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
PTPRQ-204ENST00000549355 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
PTPRQ-204ENST00000549355 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
PTPRQ-204ENST00000549355 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
PTPRQ-204ENST00000549355 CLCN6P51797 869 aa16.45■□□□□ 0.22
PTPRQ-204ENST00000549355 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
PTPRQ-204ENST00000549355 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
PTPRQ-204ENST00000549355 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPRQ-204ENST00000549355 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.2
PTPRQ-204ENST00000549355 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
PTPRQ-204ENST00000549355 POTEMA6NI47 508 aa16.28■□□□□ 0.2
PTPRQ-204ENST00000549355 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
PTPRQ-204ENST00000549355 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
PTPRQ-204ENST00000549355 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
PTPRQ-204ENST00000549355 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
PTPRQ-204ENST00000549355 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
PTPRQ-204ENST00000549355 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
PTPRQ-204ENST00000549355 LCE2DQ5TA82 110 aaPredicted RBP15.97■□□□□ 0.15
PTPRQ-204ENST00000549355 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
PTPRQ-204ENST00000549355 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
PTPRQ-204ENST00000549355 PHF12Q96QT6 1004 aa15.85■□□□□ 0.13
PTPRQ-204ENST00000549355 ASTLQ6HA08 431 aaPredicted RBP15.77■□□□□ 0.12
PTPRQ-204ENST00000549355 METRNQ9UJH8 293 aa15.75■□□□□ 0.11
PTPRQ-204ENST00000549355 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
PTPRQ-204ENST00000549355 C7P10643 843 aa15.68■□□□□ 0.1
PTPRQ-204ENST00000549355 SLC39A7Q92504 469 aa15.67■□□□□ 0.1
PTPRQ-204ENST00000549355 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms