RNA–Protein interactions for RNA: ENST00000547415.1

NOVA1-208, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 3

Gene NOVA1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-208ENST00000547415 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
NOVA1-208ENST00000547415 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
NOVA1-208ENST00000547415 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
NOVA1-208ENST00000547415 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
NOVA1-208ENST00000547415 FOXD1Q16676 465 aa19.37■□□□□ 0.69
NOVA1-208ENST00000547415 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
NOVA1-208ENST00000547415 MSH5O43196 834 aa18.37■□□□□ 0.53
NOVA1-208ENST00000547415 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
NOVA1-208ENST00000547415 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
NOVA1-208ENST00000547415 ADRA2BP18089 450 aa17.39■□□□□ 0.37
NOVA1-208ENST00000547415 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
NOVA1-208ENST00000547415 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
NOVA1-208ENST00000547415 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
NOVA1-208ENST00000547415 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
NOVA1-208ENST00000547415 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
NOVA1-208ENST00000547415 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
NOVA1-208ENST00000547415 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
NOVA1-208ENST00000547415 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
NOVA1-208ENST00000547415 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
NOVA1-208ENST00000547415 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
NOVA1-208ENST00000547415 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
NOVA1-208ENST00000547415 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
NOVA1-208ENST00000547415 POTEHQ6S545 545 aa14.98□□□□□ -0.01
NOVA1-208ENST00000547415 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
NOVA1-208ENST00000547415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.55□□□□□ -0.08
NOVA1-208ENST00000547415 DSG3P32926 999 aa14.39□□□□□ -0.11
NOVA1-208ENST00000547415 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
NOVA1-208ENST00000547415 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
NOVA1-208ENST00000547415 CAPN15O75808 1086 aa14.19□□□□□ -0.14
NOVA1-208ENST00000547415 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
NOVA1-208ENST00000547415 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
NOVA1-208ENST00000547415 ABCB7O75027 752 aa13.81□□□□□ -0.2
NOVA1-208ENST00000547415 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
NOVA1-208ENST00000547415 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
NOVA1-208ENST00000547415 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
NOVA1-208ENST00000547415 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
NOVA1-208ENST00000547415 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
NOVA1-208ENST00000547415 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
NOVA1-208ENST00000547415 APLP2Q06481 763 aa13.63□□□□□ -0.23
NOVA1-208ENST00000547415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
NOVA1-208ENST00000547415 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
NOVA1-208ENST00000547415 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
NOVA1-208ENST00000547415 POLA2Q14181 598 aa13.27□□□□□ -0.29
NOVA1-208ENST00000547415 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
NOVA1-208ENST00000547415 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
NOVA1-208ENST00000547415 HAX1O00165 279 aa13.18□□□□□ -0.3
NOVA1-208ENST00000547415 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
NOVA1-208ENST00000547415 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
NOVA1-208ENST00000547415 EVX2Q03828 476 aa13.07□□□□□ -0.32
NOVA1-208ENST00000547415 KCNA4P22459 653 aa13.03□□□□□ -0.32
NOVA1-208ENST00000547415 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
NOVA1-208ENST00000547415 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
NOVA1-208ENST00000547415 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
NOVA1-208ENST00000547415 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
NOVA1-208ENST00000547415 LHX8Q68G74 356 aa12.81□□□□□ -0.36
NOVA1-208ENST00000547415 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
NOVA1-208ENST00000547415 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
NOVA1-208ENST00000547415 GABBR2O75899 941 aa12.68□□□□□ -0.38
NOVA1-208ENST00000547415 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
NOVA1-208ENST00000547415 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
NOVA1-208ENST00000547415 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
NOVA1-208ENST00000547415 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
NOVA1-208ENST00000547415 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
NOVA1-208ENST00000547415 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
NOVA1-208ENST00000547415 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
NOVA1-208ENST00000547415 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
NOVA1-208ENST00000547415 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
NOVA1-208ENST00000547415 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
NOVA1-208ENST00000547415 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
NOVA1-208ENST00000547415 FBLN2P98095 1184 aa12.22□□□□□ -0.45
NOVA1-208ENST00000547415 CLCN6P51797 869 aa12.17□□□□□ -0.46
NOVA1-208ENST00000547415 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
NOVA1-208ENST00000547415 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
NOVA1-208ENST00000547415 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
NOVA1-208ENST00000547415 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
NOVA1-208ENST00000547415 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
NOVA1-208ENST00000547415 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
NOVA1-208ENST00000547415 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
NOVA1-208ENST00000547415 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
NOVA1-208ENST00000547415 POTEMA6NI47 508 aa12.08□□□□□ -0.48
NOVA1-208ENST00000547415 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
NOVA1-208ENST00000547415 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
NOVA1-208ENST00000547415 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
NOVA1-208ENST00000547415 ZBTB22O15209 634 aa12□□□□□ -0.49
NOVA1-208ENST00000547415 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
NOVA1-208ENST00000547415 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
NOVA1-208ENST00000547415 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
NOVA1-208ENST00000547415 GALR2O43603 387 aaPredicted RBP11.88□□□□□ -0.51
NOVA1-208ENST00000547415 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
NOVA1-208ENST00000547415 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
NOVA1-208ENST00000547415 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
NOVA1-208ENST00000547415 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
NOVA1-208ENST00000547415 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
NOVA1-208ENST00000547415 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
NOVA1-208ENST00000547415 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
NOVA1-208ENST00000547415 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
NOVA1-208ENST00000547415 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
NOVA1-208ENST00000547415 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
NOVA1-208ENST00000547415 C7P10643 843 aa11.57□□□□□ -0.56
NOVA1-208ENST00000547415 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms