RNA–Protein interactions for RNA: ENST00000546771.1

ZFC3H1-204, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 3

Gene ZFC3H1, Length 381 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-204ENST00000546771 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
ZFC3H1-204ENST00000546771 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
ZFC3H1-204ENST00000546771 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
ZFC3H1-204ENST00000546771 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
ZFC3H1-204ENST00000546771 FOXD1Q16676 465 aa18.32■□□□□ 0.52
ZFC3H1-204ENST00000546771 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
ZFC3H1-204ENST00000546771 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
ZFC3H1-204ENST00000546771 ADRA2BP18089 450 aa17.49■□□□□ 0.39
ZFC3H1-204ENST00000546771 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
ZFC3H1-204ENST00000546771 MSH5O43196 834 aa16.85■□□□□ 0.29
ZFC3H1-204ENST00000546771 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
ZFC3H1-204ENST00000546771 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
ZFC3H1-204ENST00000546771 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
ZFC3H1-204ENST00000546771 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
ZFC3H1-204ENST00000546771 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
ZFC3H1-204ENST00000546771 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
ZFC3H1-204ENST00000546771 KCNA4P22459 653 aa15.46■□□□□ 0.07
ZFC3H1-204ENST00000546771 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
ZFC3H1-204ENST00000546771 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
ZFC3H1-204ENST00000546771 HOXD11P31277 338 aaPredicted RBP15.28■□□□□ 0.04
ZFC3H1-204ENST00000546771 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
ZFC3H1-204ENST00000546771 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
ZFC3H1-204ENST00000546771 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
ZFC3H1-204ENST00000546771 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
ZFC3H1-204ENST00000546771 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
ZFC3H1-204ENST00000546771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
ZFC3H1-204ENST00000546771 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
ZFC3H1-204ENST00000546771 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
ZFC3H1-204ENST00000546771 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
ZFC3H1-204ENST00000546771 ZBTB22O15209 634 aa14.27□□□□□ -0.13
ZFC3H1-204ENST00000546771 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
ZFC3H1-204ENST00000546771 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
ZFC3H1-204ENST00000546771 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
ZFC3H1-204ENST00000546771 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
ZFC3H1-204ENST00000546771 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
ZFC3H1-204ENST00000546771 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
ZFC3H1-204ENST00000546771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
ZFC3H1-204ENST00000546771 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
ZFC3H1-204ENST00000546771 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
ZFC3H1-204ENST00000546771 CAPN15O75808 1086 aa13.9□□□□□ -0.18
ZFC3H1-204ENST00000546771 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
ZFC3H1-204ENST00000546771 APLP2Q06481 763 aa13.82□□□□□ -0.2
ZFC3H1-204ENST00000546771 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
ZFC3H1-204ENST00000546771 DSG3P32926 999 aa13.74□□□□□ -0.21
ZFC3H1-204ENST00000546771 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
ZFC3H1-204ENST00000546771 ABCB7O75027 752 aa13.68□□□□□ -0.22
ZFC3H1-204ENST00000546771 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
ZFC3H1-204ENST00000546771 POLA2Q14181 598 aa13.54□□□□□ -0.24
ZFC3H1-204ENST00000546771 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
ZFC3H1-204ENST00000546771 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
ZFC3H1-204ENST00000546771 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
ZFC3H1-204ENST00000546771 FBLN2P98095 1184 aa13.11□□□□□ -0.31
ZFC3H1-204ENST00000546771 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
ZFC3H1-204ENST00000546771 POTEHQ6S545 545 aa12.98□□□□□ -0.33
ZFC3H1-204ENST00000546771 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
ZFC3H1-204ENST00000546771 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
ZFC3H1-204ENST00000546771 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
ZFC3H1-204ENST00000546771 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
ZFC3H1-204ENST00000546771 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
ZFC3H1-204ENST00000546771 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
ZFC3H1-204ENST00000546771 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
ZFC3H1-204ENST00000546771 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
ZFC3H1-204ENST00000546771 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
ZFC3H1-204ENST00000546771 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
ZFC3H1-204ENST00000546771 FKBP8Q14318 412 aa12.63□□□□□ -0.39
ZFC3H1-204ENST00000546771 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
ZFC3H1-204ENST00000546771 PROM2Q8N271 834 aa12.55□□□□□ -0.4
ZFC3H1-204ENST00000546771 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
ZFC3H1-204ENST00000546771 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
ZFC3H1-204ENST00000546771 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
ZFC3H1-204ENST00000546771 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZFC3H1-204ENST00000546771 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
ZFC3H1-204ENST00000546771 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
ZFC3H1-204ENST00000546771 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
ZFC3H1-204ENST00000546771 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
ZFC3H1-204ENST00000546771 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
ZFC3H1-204ENST00000546771 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
ZFC3H1-204ENST00000546771 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
ZFC3H1-204ENST00000546771 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
ZFC3H1-204ENST00000546771 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
ZFC3H1-204ENST00000546771 MIER1Q8N108 512 aa12.09□□□□□ -0.47
ZFC3H1-204ENST00000546771 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
ZFC3H1-204ENST00000546771 EVX2Q03828 476 aa12.05□□□□□ -0.48
ZFC3H1-204ENST00000546771 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
ZFC3H1-204ENST00000546771 HAX1O00165 279 aa12.03□□□□□ -0.48
ZFC3H1-204ENST00000546771 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
ZFC3H1-204ENST00000546771 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
ZFC3H1-204ENST00000546771 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
ZFC3H1-204ENST00000546771 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZFC3H1-204ENST00000546771 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
ZFC3H1-204ENST00000546771 NUBP1P53384 320 aa11.86□□□□□ -0.51
ZFC3H1-204ENST00000546771 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
ZFC3H1-204ENST00000546771 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
ZFC3H1-204ENST00000546771 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
ZFC3H1-204ENST00000546771 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
ZFC3H1-204ENST00000546771 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
ZFC3H1-204ENST00000546771 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
ZFC3H1-204ENST00000546771 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
ZFC3H1-204ENST00000546771 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
ZFC3H1-204ENST00000546771 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms