RNA–Protein interactions for RNA: ENST00000546475.1

ZFC3H1-202, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 3

Gene ZFC3H1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-202ENST00000546475 AEBP2Q6ZN18 517 aaPredicted RBP18.34■□□□□ 0.53
ZFC3H1-202ENST00000546475 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
ZFC3H1-202ENST00000546475 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
ZFC3H1-202ENST00000546475 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
ZFC3H1-202ENST00000546475 FOXD1Q16676 465 aa14.69□□□□□ -0.06
ZFC3H1-202ENST00000546475 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
ZFC3H1-202ENST00000546475 MSH5O43196 834 aa13.88□□□□□ -0.19
ZFC3H1-202ENST00000546475 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
ZFC3H1-202ENST00000546475 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
ZFC3H1-202ENST00000546475 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
ZFC3H1-202ENST00000546475 ADRA2BP18089 450 aa13.41□□□□□ -0.26
ZFC3H1-202ENST00000546475 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
ZFC3H1-202ENST00000546475 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
ZFC3H1-202ENST00000546475 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
ZFC3H1-202ENST00000546475 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
ZFC3H1-202ENST00000546475 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
ZFC3H1-202ENST00000546475 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
ZFC3H1-202ENST00000546475 KCNA4P22459 653 aa11.81□□□□□ -0.52
ZFC3H1-202ENST00000546475 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
ZFC3H1-202ENST00000546475 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
ZFC3H1-202ENST00000546475 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
ZFC3H1-202ENST00000546475 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
ZFC3H1-202ENST00000546475 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
ZFC3H1-202ENST00000546475 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
ZFC3H1-202ENST00000546475 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
ZFC3H1-202ENST00000546475 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
ZFC3H1-202ENST00000546475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.6
ZFC3H1-202ENST00000546475 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
ZFC3H1-202ENST00000546475 POTEHQ6S545 545 aa11.18□□□□□ -0.62
ZFC3H1-202ENST00000546475 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
ZFC3H1-202ENST00000546475 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
ZFC3H1-202ENST00000546475 CAPN15O75808 1086 aa10.96□□□□□ -0.65
ZFC3H1-202ENST00000546475 DSG3P32926 999 aa10.94□□□□□ -0.66
ZFC3H1-202ENST00000546475 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
ZFC3H1-202ENST00000546475 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
ZFC3H1-202ENST00000546475 ZBTB22O15209 634 aa10.88□□□□□ -0.67
ZFC3H1-202ENST00000546475 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
ZFC3H1-202ENST00000546475 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
ZFC3H1-202ENST00000546475 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
ZFC3H1-202ENST00000546475 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
ZFC3H1-202ENST00000546475 ABCB7O75027 752 aa10.68□□□□□ -0.7
ZFC3H1-202ENST00000546475 APLP2Q06481 763 aa10.65□□□□□ -0.7
ZFC3H1-202ENST00000546475 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
ZFC3H1-202ENST00000546475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
ZFC3H1-202ENST00000546475 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
ZFC3H1-202ENST00000546475 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
ZFC3H1-202ENST00000546475 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
ZFC3H1-202ENST00000546475 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
ZFC3H1-202ENST00000546475 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
ZFC3H1-202ENST00000546475 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
ZFC3H1-202ENST00000546475 POLA2Q14181 598 aa10.31□□□□□ -0.76
ZFC3H1-202ENST00000546475 SP7Q8TDD2 431 aaPredicted RBP10.17□□□□□ -0.78
ZFC3H1-202ENST00000546475 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
ZFC3H1-202ENST00000546475 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
ZFC3H1-202ENST00000546475 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
ZFC3H1-202ENST00000546475 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
ZFC3H1-202ENST00000546475 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
ZFC3H1-202ENST00000546475 HAX1O00165 279 aa9.99□□□□□ -0.81
ZFC3H1-202ENST00000546475 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
ZFC3H1-202ENST00000546475 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
ZFC3H1-202ENST00000546475 FBLN2P98095 1184 aa9.95□□□□□ -0.82
ZFC3H1-202ENST00000546475 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
ZFC3H1-202ENST00000546475 EVX2Q03828 476 aa9.8□□□□□ -0.84
ZFC3H1-202ENST00000546475 FKBP8Q14318 412 aa9.79□□□□□ -0.84
ZFC3H1-202ENST00000546475 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
ZFC3H1-202ENST00000546475 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
ZFC3H1-202ENST00000546475 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
ZFC3H1-202ENST00000546475 SPDYE2Q495Y8 402 aa9.72□□□□□ -0.85
ZFC3H1-202ENST00000546475 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
ZFC3H1-202ENST00000546475 CLEC11AQ9Y240 323 aa9.68□□□□□ -0.86
ZFC3H1-202ENST00000546475 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
ZFC3H1-202ENST00000546475 SPDYE1Q8NFV5 336 aaPredicted RBP9.65□□□□□ -0.86
ZFC3H1-202ENST00000546475 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
ZFC3H1-202ENST00000546475 C19orf67A6NJJ6 358 aa9.62□□□□□ -0.87
ZFC3H1-202ENST00000546475 PROM2Q8N271 834 aa9.62□□□□□ -0.87
ZFC3H1-202ENST00000546475 GABBR2O75899 941 aa9.57□□□□□ -0.88
ZFC3H1-202ENST00000546475 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
ZFC3H1-202ENST00000546475 LHX8Q68G74 356 aa9.54□□□□□ -0.88
ZFC3H1-202ENST00000546475 PLSCR2Q9NRY7 297 aa9.54□□□□□ -0.88
ZFC3H1-202ENST00000546475 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
ZFC3H1-202ENST00000546475 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
ZFC3H1-202ENST00000546475 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
ZFC3H1-202ENST00000546475 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
ZFC3H1-202ENST00000546475 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
ZFC3H1-202ENST00000546475 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
ZFC3H1-202ENST00000546475 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
ZFC3H1-202ENST00000546475 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
ZFC3H1-202ENST00000546475 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
ZFC3H1-202ENST00000546475 CLCN6P51797 869 aa9.26□□□□□ -0.93
ZFC3H1-202ENST00000546475 MIER1Q8N108 512 aa9.21□□□□□ -0.94
ZFC3H1-202ENST00000546475 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.94
ZFC3H1-202ENST00000546475 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
ZFC3H1-202ENST00000546475 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
ZFC3H1-202ENST00000546475 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
ZFC3H1-202ENST00000546475 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
ZFC3H1-202ENST00000546475 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
ZFC3H1-202ENST00000546475 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
ZFC3H1-202ENST00000546475 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
ZFC3H1-202ENST00000546475 ZBTB47Q9UFB7 747 aaPredicted RBP9.11□□□□□ -0.95
ZFC3H1-202ENST00000546475 MNX1P50219 401 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms