RNA–Protein interactions for RNA: ENST00000546444.1

ARHGAP29-204, Transcript of Rho GTPase activating protein 29, humanhuman

TSL 5

Gene ARHGAP29, Length 1,807 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP29-204ENST00000546444 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
ARHGAP29-204ENST00000546444 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
ARHGAP29-204ENST00000546444 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
ARHGAP29-204ENST00000546444 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
ARHGAP29-204ENST00000546444 FOXD1Q16676 465 aa16.63■□□□□ 0.25
ARHGAP29-204ENST00000546444 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
ARHGAP29-204ENST00000546444 ADRA2BP18089 450 aa15.82■□□□□ 0.12
ARHGAP29-204ENST00000546444 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
ARHGAP29-204ENST00000546444 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
ARHGAP29-204ENST00000546444 MSH5O43196 834 aa15.52■□□□□ 0.08
ARHGAP29-204ENST00000546444 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
ARHGAP29-204ENST00000546444 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
ARHGAP29-204ENST00000546444 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
ARHGAP29-204ENST00000546444 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
ARHGAP29-204ENST00000546444 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
ARHGAP29-204ENST00000546444 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
ARHGAP29-204ENST00000546444 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
ARHGAP29-204ENST00000546444 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
ARHGAP29-204ENST00000546444 KCNA4P22459 653 aa13.93□□□□□ -0.18
ARHGAP29-204ENST00000546444 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
ARHGAP29-204ENST00000546444 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
ARHGAP29-204ENST00000546444 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.22
ARHGAP29-204ENST00000546444 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
ARHGAP29-204ENST00000546444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
ARHGAP29-204ENST00000546444 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
ARHGAP29-204ENST00000546444 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
ARHGAP29-204ENST00000546444 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
ARHGAP29-204ENST00000546444 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
ARHGAP29-204ENST00000546444 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
ARHGAP29-204ENST00000546444 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
ARHGAP29-204ENST00000546444 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
ARHGAP29-204ENST00000546444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
ARHGAP29-204ENST00000546444 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
ARHGAP29-204ENST00000546444 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
ARHGAP29-204ENST00000546444 APLP2Q06481 763 aa12.88□□□□□ -0.35
ARHGAP29-204ENST00000546444 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.35
ARHGAP29-204ENST00000546444 ZBTB22O15209 634 aa12.76□□□□□ -0.37
ARHGAP29-204ENST00000546444 CAPN15O75808 1086 aa12.72□□□□□ -0.37
ARHGAP29-204ENST00000546444 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
ARHGAP29-204ENST00000546444 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
ARHGAP29-204ENST00000546444 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
ARHGAP29-204ENST00000546444 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
ARHGAP29-204ENST00000546444 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
ARHGAP29-204ENST00000546444 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
ARHGAP29-204ENST00000546444 DSG3P32926 999 aa12.5□□□□□ -0.41
ARHGAP29-204ENST00000546444 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
ARHGAP29-204ENST00000546444 ABCB7O75027 752 aa12.4□□□□□ -0.42
ARHGAP29-204ENST00000546444 POLA2Q14181 598 aa12.34□□□□□ -0.43
ARHGAP29-204ENST00000546444 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
ARHGAP29-204ENST00000546444 FBLN2P98095 1184 aa12.09□□□□□ -0.47
ARHGAP29-204ENST00000546444 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.48
ARHGAP29-204ENST00000546444 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
ARHGAP29-204ENST00000546444 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
ARHGAP29-204ENST00000546444 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
ARHGAP29-204ENST00000546444 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
ARHGAP29-204ENST00000546444 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
ARHGAP29-204ENST00000546444 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
ARHGAP29-204ENST00000546444 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
ARHGAP29-204ENST00000546444 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
ARHGAP29-204ENST00000546444 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
ARHGAP29-204ENST00000546444 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
ARHGAP29-204ENST00000546444 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
ARHGAP29-204ENST00000546444 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
ARHGAP29-204ENST00000546444 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
ARHGAP29-204ENST00000546444 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
ARHGAP29-204ENST00000546444 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.58
ARHGAP29-204ENST00000546444 FKBP8Q14318 412 aa11.44□□□□□ -0.58
ARHGAP29-204ENST00000546444 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
ARHGAP29-204ENST00000546444 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
ARHGAP29-204ENST00000546444 POTEHQ6S545 545 aa11.36□□□□□ -0.59
ARHGAP29-204ENST00000546444 PROM2Q8N271 834 aa11.36□□□□□ -0.59
ARHGAP29-204ENST00000546444 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.6
ARHGAP29-204ENST00000546444 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
ARHGAP29-204ENST00000546444 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
ARHGAP29-204ENST00000546444 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
ARHGAP29-204ENST00000546444 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
ARHGAP29-204ENST00000546444 PLEKHG5O94827 1062 aa11.12□□□□□ -0.63
ARHGAP29-204ENST00000546444 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
ARHGAP29-204ENST00000546444 MIER1Q8N108 512 aa11.07□□□□□ -0.64
ARHGAP29-204ENST00000546444 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
ARHGAP29-204ENST00000546444 HAX1O00165 279 aa11.05□□□□□ -0.64
ARHGAP29-204ENST00000546444 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
ARHGAP29-204ENST00000546444 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.64
ARHGAP29-204ENST00000546444 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
ARHGAP29-204ENST00000546444 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
ARHGAP29-204ENST00000546444 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
ARHGAP29-204ENST00000546444 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
ARHGAP29-204ENST00000546444 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
ARHGAP29-204ENST00000546444 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
ARHGAP29-204ENST00000546444 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
ARHGAP29-204ENST00000546444 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
ARHGAP29-204ENST00000546444 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
ARHGAP29-204ENST00000546444 EVX2Q03828 476 aa10.81□□□□□ -0.68
ARHGAP29-204ENST00000546444 CLCN6P51797 869 aa10.79□□□□□ -0.68
ARHGAP29-204ENST00000546444 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
ARHGAP29-204ENST00000546444 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
ARHGAP29-204ENST00000546444 NUBP1P53384 320 aa10.74□□□□□ -0.69
ARHGAP29-204ENST00000546444 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
ARHGAP29-204ENST00000546444 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
ARHGAP29-204ENST00000546444 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms