RNA–Protein interactions for RNA: ENST00000545000.1

CWC27-205, Transcript of CWC27 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC27, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC27-205ENST00000545000 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
CWC27-205ENST00000545000 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
CWC27-205ENST00000545000 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
CWC27-205ENST00000545000 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
CWC27-205ENST00000545000 FOXD1Q16676 465 aa16.34■□□□□ 0.21
CWC27-205ENST00000545000 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CWC27-205ENST00000545000 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
CWC27-205ENST00000545000 ADRA2BP18089 450 aa15.67■□□□□ 0.1
CWC27-205ENST00000545000 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
CWC27-205ENST00000545000 MSH5O43196 834 aa14.99□□□□□ -0.01
CWC27-205ENST00000545000 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
CWC27-205ENST00000545000 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
CWC27-205ENST00000545000 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
CWC27-205ENST00000545000 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.15
CWC27-205ENST00000545000 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
CWC27-205ENST00000545000 KCNA4P22459 653 aa13.96□□□□□ -0.17
CWC27-205ENST00000545000 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
CWC27-205ENST00000545000 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
CWC27-205ENST00000545000 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
CWC27-205ENST00000545000 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
CWC27-205ENST00000545000 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
CWC27-205ENST00000545000 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CWC27-205ENST00000545000 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
CWC27-205ENST00000545000 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
CWC27-205ENST00000545000 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
CWC27-205ENST00000545000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
CWC27-205ENST00000545000 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
CWC27-205ENST00000545000 ZBTB22O15209 634 aa12.89□□□□□ -0.35
CWC27-205ENST00000545000 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
CWC27-205ENST00000545000 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
CWC27-205ENST00000545000 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
CWC27-205ENST00000545000 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
CWC27-205ENST00000545000 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
CWC27-205ENST00000545000 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
CWC27-205ENST00000545000 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
CWC27-205ENST00000545000 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
CWC27-205ENST00000545000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
CWC27-205ENST00000545000 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
CWC27-205ENST00000545000 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
CWC27-205ENST00000545000 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
CWC27-205ENST00000545000 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CWC27-205ENST00000545000 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
CWC27-205ENST00000545000 APLP2Q06481 763 aa12.35□□□□□ -0.43
CWC27-205ENST00000545000 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
CWC27-205ENST00000545000 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
CWC27-205ENST00000545000 ABCB7O75027 752 aa12.26□□□□□ -0.45
CWC27-205ENST00000545000 DSG3P32926 999 aa12.25□□□□□ -0.45
CWC27-205ENST00000545000 POLA2Q14181 598 aa12.13□□□□□ -0.47
CWC27-205ENST00000545000 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
CWC27-205ENST00000545000 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
CWC27-205ENST00000545000 FBLN2P98095 1184 aa11.78□□□□□ -0.52
CWC27-205ENST00000545000 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
CWC27-205ENST00000545000 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
CWC27-205ENST00000545000 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
CWC27-205ENST00000545000 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
CWC27-205ENST00000545000 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
CWC27-205ENST00000545000 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
CWC27-205ENST00000545000 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
CWC27-205ENST00000545000 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
CWC27-205ENST00000545000 FKBP8Q14318 412 aa11.46□□□□□ -0.57
CWC27-205ENST00000545000 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
CWC27-205ENST00000545000 POTEHQ6S545 545 aa11.43□□□□□ -0.58
CWC27-205ENST00000545000 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
CWC27-205ENST00000545000 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
CWC27-205ENST00000545000 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
CWC27-205ENST00000545000 PROM2Q8N271 834 aa11.28□□□□□ -0.6
CWC27-205ENST00000545000 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
CWC27-205ENST00000545000 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
CWC27-205ENST00000545000 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
CWC27-205ENST00000545000 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
CWC27-205ENST00000545000 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
CWC27-205ENST00000545000 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
CWC27-205ENST00000545000 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
CWC27-205ENST00000545000 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
CWC27-205ENST00000545000 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
CWC27-205ENST00000545000 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
CWC27-205ENST00000545000 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
CWC27-205ENST00000545000 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
CWC27-205ENST00000545000 MIER1Q8N108 512 aa10.89□□□□□ -0.67
CWC27-205ENST00000545000 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
CWC27-205ENST00000545000 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
CWC27-205ENST00000545000 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
CWC27-205ENST00000545000 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
CWC27-205ENST00000545000 PLEKHG5O94827 1062 aa10.75□□□□□ -0.69
CWC27-205ENST00000545000 EVX2Q03828 476 aa10.73□□□□□ -0.69
CWC27-205ENST00000545000 HAX1O00165 279 aa10.72□□□□□ -0.69
CWC27-205ENST00000545000 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
CWC27-205ENST00000545000 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
CWC27-205ENST00000545000 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
CWC27-205ENST00000545000 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
CWC27-205ENST00000545000 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
CWC27-205ENST00000545000 NUBP1P53384 320 aa10.66□□□□□ -0.7
CWC27-205ENST00000545000 ZBTB47Q9UFB7 747 aaPredicted RBP10.65□□□□□ -0.7
CWC27-205ENST00000545000 TSPYL2Q9H2G4 693 aaPredicted RBP10.62□□□□□ -0.71
CWC27-205ENST00000545000 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
CWC27-205ENST00000545000 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
CWC27-205ENST00000545000 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
CWC27-205ENST00000545000 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
CWC27-205ENST00000545000 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
CWC27-205ENST00000545000 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms