RNA–Protein interactions for RNA: ENST00000543998.1

TCTN2-204, Transcript of tectonic family member 2, humanhuman

TSL 5

Gene TCTN2, Length 2,918 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN2-204ENST00000543998 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
TCTN2-204ENST00000543998 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
TCTN2-204ENST00000543998 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
TCTN2-204ENST00000543998 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
TCTN2-204ENST00000543998 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
TCTN2-204ENST00000543998 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
TCTN2-204ENST00000543998 KCNA4P22459 653 aa14.1□□□□□ -0.15
TCTN2-204ENST00000543998 ADRA2BP18089 450 aa13.97□□□□□ -0.17
TCTN2-204ENST00000543998 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
TCTN2-204ENST00000543998 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
TCTN2-204ENST00000543998 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
TCTN2-204ENST00000543998 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
TCTN2-204ENST00000543998 FOXD1Q16676 465 aa13.18□□□□□ -0.3
TCTN2-204ENST00000543998 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
TCTN2-204ENST00000543998 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
TCTN2-204ENST00000543998 ZBTB22O15209 634 aa13.04□□□□□ -0.32
TCTN2-204ENST00000543998 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
TCTN2-204ENST00000543998 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
TCTN2-204ENST00000543998 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
TCTN2-204ENST00000543998 PIAS4Q8N2W9 510 aaPredicted RBP12.68□□□□□ -0.38
TCTN2-204ENST00000543998 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
TCTN2-204ENST00000543998 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
TCTN2-204ENST00000543998 FKBP8Q14318 412 aa12.34□□□□□ -0.43
TCTN2-204ENST00000543998 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
TCTN2-204ENST00000543998 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
TCTN2-204ENST00000543998 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
TCTN2-204ENST00000543998 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
TCTN2-204ENST00000543998 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
TCTN2-204ENST00000543998 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
TCTN2-204ENST00000543998 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
TCTN2-204ENST00000543998 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
TCTN2-204ENST00000543998 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
TCTN2-204ENST00000543998 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
TCTN2-204ENST00000543998 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
TCTN2-204ENST00000543998 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
TCTN2-204ENST00000543998 BCANQ96GW7 911 aa11.7□□□□□ -0.54
TCTN2-204ENST00000543998 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
TCTN2-204ENST00000543998 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
TCTN2-204ENST00000543998 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
TCTN2-204ENST00000543998 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
TCTN2-204ENST00000543998 MSH5O43196 834 aa11.53□□□□□ -0.56
TCTN2-204ENST00000543998 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
TCTN2-204ENST00000543998 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
TCTN2-204ENST00000543998 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
TCTN2-204ENST00000543998 FBLN2P98095 1184 aa11.44□□□□□ -0.58
TCTN2-204ENST00000543998 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
TCTN2-204ENST00000543998 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
TCTN2-204ENST00000543998 PKD2Q13563 968 aa11.36□□□□□ -0.59
TCTN2-204ENST00000543998 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
TCTN2-204ENST00000543998 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
TCTN2-204ENST00000543998 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
TCTN2-204ENST00000543998 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.6
TCTN2-204ENST00000543998 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
TCTN2-204ENST00000543998 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
TCTN2-204ENST00000543998 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCTN2-204ENST00000543998 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
TCTN2-204ENST00000543998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
TCTN2-204ENST00000543998 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
TCTN2-204ENST00000543998 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
TCTN2-204ENST00000543998 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.63
TCTN2-204ENST00000543998 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
TCTN2-204ENST00000543998 BBXQ8WY36 941 aaPredicted RBP11.14□□□□□ -0.63
TCTN2-204ENST00000543998 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
TCTN2-204ENST00000543998 MKRN4PQ13434 485 aaPredicted RBP11.12□□□□□ -0.63
TCTN2-204ENST00000543998 PROM2Q8N271 834 aa11.12□□□□□ -0.63
TCTN2-204ENST00000543998 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
TCTN2-204ENST00000543998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
TCTN2-204ENST00000543998 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
TCTN2-204ENST00000543998 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
TCTN2-204ENST00000543998 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
TCTN2-204ENST00000543998 RGL2O15211 777 aa11.01□□□□□ -0.65
TCTN2-204ENST00000543998 SPRYD3Q8NCJ5 442 aa11□□□□□ -0.65
TCTN2-204ENST00000543998 ARXQ96QS3 562 aa10.99□□□□□ -0.65
TCTN2-204ENST00000543998 NBR1Q14596 966 aa10.97□□□□□ -0.65
TCTN2-204ENST00000543998 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
TCTN2-204ENST00000543998 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
TCTN2-204ENST00000543998 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
TCTN2-204ENST00000543998 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
TCTN2-204ENST00000543998 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
TCTN2-204ENST00000543998 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
TCTN2-204ENST00000543998 HOMEZQ8IX15 550 aa10.77□□□□□ -0.69
TCTN2-204ENST00000543998 C14orf37Q86TY3 774 aa10.76□□□□□ -0.69
TCTN2-204ENST00000543998 POLA2Q14181 598 aa10.72□□□□□ -0.69
TCTN2-204ENST00000543998 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
TCTN2-204ENST00000543998 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
TCTN2-204ENST00000543998 CIZ1Q9ULV3 898 aaPredicted RBP10.7□□□□□ -0.7
TCTN2-204ENST00000543998 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
TCTN2-204ENST00000543998 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
TCTN2-204ENST00000543998 APLP2Q06481 763 aa10.62□□□□□ -0.71
TCTN2-204ENST00000543998 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
TCTN2-204ENST00000543998 MIER1Q8N108 512 aa10.61□□□□□ -0.71
TCTN2-204ENST00000543998 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
TCTN2-204ENST00000543998 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
TCTN2-204ENST00000543998 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
TCTN2-204ENST00000543998 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
TCTN2-204ENST00000543998 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
TCTN2-204ENST00000543998 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
TCTN2-204ENST00000543998 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
TCTN2-204ENST00000543998 ABCB7O75027 752 aa10.46□□□□□ -0.74
TCTN2-204ENST00000543998 CAPN15O75808 1086 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms