RNA–Protein interactions for RNA: ENST00000543746.1

PMFBP1-211, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 4

Gene PMFBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-211ENST00000543746 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
PMFBP1-211ENST00000543746 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
PMFBP1-211ENST00000543746 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
PMFBP1-211ENST00000543746 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
PMFBP1-211ENST00000543746 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
PMFBP1-211ENST00000543746 FOXD1Q16676 465 aa19.9■□□□□ 0.78
PMFBP1-211ENST00000543746 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
PMFBP1-211ENST00000543746 ADRA2BP18089 450 aa19.13■□□□□ 0.65
PMFBP1-211ENST00000543746 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
PMFBP1-211ENST00000543746 MSH5O43196 834 aa18.28■□□□□ 0.52
PMFBP1-211ENST00000543746 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
PMFBP1-211ENST00000543746 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
PMFBP1-211ENST00000543746 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
PMFBP1-211ENST00000543746 KCNA4P22459 653 aa17.24■□□□□ 0.35
PMFBP1-211ENST00000543746 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
PMFBP1-211ENST00000543746 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
PMFBP1-211ENST00000543746 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
PMFBP1-211ENST00000543746 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
PMFBP1-211ENST00000543746 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
PMFBP1-211ENST00000543746 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
PMFBP1-211ENST00000543746 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
PMFBP1-211ENST00000543746 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
PMFBP1-211ENST00000543746 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
PMFBP1-211ENST00000543746 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
PMFBP1-211ENST00000543746 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
PMFBP1-211ENST00000543746 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
PMFBP1-211ENST00000543746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
PMFBP1-211ENST00000543746 ZBTB22O15209 634 aa15.9■□□□□ 0.14
PMFBP1-211ENST00000543746 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
PMFBP1-211ENST00000543746 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
PMFBP1-211ENST00000543746 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
PMFBP1-211ENST00000543746 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
PMFBP1-211ENST00000543746 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
PMFBP1-211ENST00000543746 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
PMFBP1-211ENST00000543746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
PMFBP1-211ENST00000543746 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
PMFBP1-211ENST00000543746 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
PMFBP1-211ENST00000543746 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
PMFBP1-211ENST00000543746 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
PMFBP1-211ENST00000543746 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
PMFBP1-211ENST00000543746 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
PMFBP1-211ENST00000543746 APLP2Q06481 763 aa15.21■□□□□ 0.03
PMFBP1-211ENST00000543746 CAPN15O75808 1086 aa15.16■□□□□ 0.02
PMFBP1-211ENST00000543746 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
PMFBP1-211ENST00000543746 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
PMFBP1-211ENST00000543746 DSG3P32926 999 aa14.95□□□□□ -0.02
PMFBP1-211ENST00000543746 ABCB7O75027 752 aa14.91□□□□□ -0.02
PMFBP1-211ENST00000543746 POLA2Q14181 598 aa14.86□□□□□ -0.03
PMFBP1-211ENST00000543746 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
PMFBP1-211ENST00000543746 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
PMFBP1-211ENST00000543746 FBLN2P98095 1184 aa14.5□□□□□ -0.09
PMFBP1-211ENST00000543746 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
PMFBP1-211ENST00000543746 FKBP8Q14318 412 aa14.21□□□□□ -0.13
PMFBP1-211ENST00000543746 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
PMFBP1-211ENST00000543746 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
PMFBP1-211ENST00000543746 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
PMFBP1-211ENST00000543746 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
PMFBP1-211ENST00000543746 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
PMFBP1-211ENST00000543746 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
PMFBP1-211ENST00000543746 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
PMFBP1-211ENST00000543746 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
PMFBP1-211ENST00000543746 PROM2Q8N271 834 aa14□□□□□ -0.17
PMFBP1-211ENST00000543746 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
PMFBP1-211ENST00000543746 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
PMFBP1-211ENST00000543746 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
PMFBP1-211ENST00000543746 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
PMFBP1-211ENST00000543746 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
PMFBP1-211ENST00000543746 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
PMFBP1-211ENST00000543746 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
PMFBP1-211ENST00000543746 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
PMFBP1-211ENST00000543746 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
PMFBP1-211ENST00000543746 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
PMFBP1-211ENST00000543746 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
PMFBP1-211ENST00000543746 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
PMFBP1-211ENST00000543746 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
PMFBP1-211ENST00000543746 MIER1Q8N108 512 aa13.44□□□□□ -0.26
PMFBP1-211ENST00000543746 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
PMFBP1-211ENST00000543746 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
PMFBP1-211ENST00000543746 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
PMFBP1-211ENST00000543746 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
PMFBP1-211ENST00000543746 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
PMFBP1-211ENST00000543746 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PMFBP1-211ENST00000543746 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
PMFBP1-211ENST00000543746 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
PMFBP1-211ENST00000543746 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
PMFBP1-211ENST00000543746 POTEHQ6S545 545 aa13.21□□□□□ -0.29
PMFBP1-211ENST00000543746 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
PMFBP1-211ENST00000543746 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
PMFBP1-211ENST00000543746 NUBP1P53384 320 aa13.15□□□□□ -0.3
PMFBP1-211ENST00000543746 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
PMFBP1-211ENST00000543746 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
PMFBP1-211ENST00000543746 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
PMFBP1-211ENST00000543746 HAX1O00165 279 aa13.01□□□□□ -0.33
PMFBP1-211ENST00000543746 EVX2Q03828 476 aa12.99□□□□□ -0.33
PMFBP1-211ENST00000543746 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
PMFBP1-211ENST00000543746 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
PMFBP1-211ENST00000543746 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
PMFBP1-211ENST00000543746 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
PMFBP1-211ENST00000543746 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
PMFBP1-211ENST00000543746 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms