RNA–Protein interactions for RNA: ENST00000542224.1

LMNTD1-209, Transcript of lamin tail domain containing 1, humanhuman

TSL 5

Gene LMNTD1, Length 525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-209ENST00000542224 AEBP2Q6ZN18 517 aaPredicted RBP19.93■□□□□ 0.78
LMNTD1-209ENST00000542224 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
LMNTD1-209ENST00000542224 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
LMNTD1-209ENST00000542224 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
LMNTD1-209ENST00000542224 FOXD1Q16676 465 aa16.04■□□□□ 0.16
LMNTD1-209ENST00000542224 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
LMNTD1-209ENST00000542224 MSH5O43196 834 aa15.3■□□□□ 0.04
LMNTD1-209ENST00000542224 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
LMNTD1-209ENST00000542224 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
LMNTD1-209ENST00000542224 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
LMNTD1-209ENST00000542224 ADRA2BP18089 450 aa14.49□□□□□ -0.09
LMNTD1-209ENST00000542224 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
LMNTD1-209ENST00000542224 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
LMNTD1-209ENST00000542224 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
LMNTD1-209ENST00000542224 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
LMNTD1-209ENST00000542224 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
LMNTD1-209ENST00000542224 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
LMNTD1-209ENST00000542224 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
LMNTD1-209ENST00000542224 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
LMNTD1-209ENST00000542224 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
LMNTD1-209ENST00000542224 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
LMNTD1-209ENST00000542224 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
LMNTD1-209ENST00000542224 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
LMNTD1-209ENST00000542224 POTEHQ6S545 545 aa12.34□□□□□ -0.43
LMNTD1-209ENST00000542224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
LMNTD1-209ENST00000542224 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
LMNTD1-209ENST00000542224 CAPN15O75808 1086 aa11.95□□□□□ -0.5
LMNTD1-209ENST00000542224 DSG3P32926 999 aa11.94□□□□□ -0.5
LMNTD1-209ENST00000542224 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
LMNTD1-209ENST00000542224 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
LMNTD1-209ENST00000542224 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
LMNTD1-209ENST00000542224 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
LMNTD1-209ENST00000542224 APLP2Q06481 763 aa11.59□□□□□ -0.55
LMNTD1-209ENST00000542224 ABCB7O75027 752 aa11.58□□□□□ -0.56
LMNTD1-209ENST00000542224 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
LMNTD1-209ENST00000542224 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
LMNTD1-209ENST00000542224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
LMNTD1-209ENST00000542224 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
LMNTD1-209ENST00000542224 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
LMNTD1-209ENST00000542224 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
LMNTD1-209ENST00000542224 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
LMNTD1-209ENST00000542224 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
LMNTD1-209ENST00000542224 POLA2Q14181 598 aa11.16□□□□□ -0.62
LMNTD1-209ENST00000542224 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
LMNTD1-209ENST00000542224 HAX1O00165 279 aa11.04□□□□□ -0.64
LMNTD1-209ENST00000542224 KCNA4P22459 653 aa11.02□□□□□ -0.65
LMNTD1-209ENST00000542224 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
LMNTD1-209ENST00000542224 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
LMNTD1-209ENST00000542224 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
LMNTD1-209ENST00000542224 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
LMNTD1-209ENST00000542224 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
LMNTD1-209ENST00000542224 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
LMNTD1-209ENST00000542224 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
LMNTD1-209ENST00000542224 EVX2Q03828 476 aa10.74□□□□□ -0.69
LMNTD1-209ENST00000542224 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
LMNTD1-209ENST00000542224 LHX8Q68G74 356 aa10.62□□□□□ -0.71
LMNTD1-209ENST00000542224 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
LMNTD1-209ENST00000542224 GABBR2O75899 941 aa10.52□□□□□ -0.73
LMNTD1-209ENST00000542224 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
LMNTD1-209ENST00000542224 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
LMNTD1-209ENST00000542224 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
LMNTD1-209ENST00000542224 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
LMNTD1-209ENST00000542224 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
LMNTD1-209ENST00000542224 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
LMNTD1-209ENST00000542224 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
LMNTD1-209ENST00000542224 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
LMNTD1-209ENST00000542224 FBLN2P98095 1184 aa10.41□□□□□ -0.74
LMNTD1-209ENST00000542224 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
LMNTD1-209ENST00000542224 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
LMNTD1-209ENST00000542224 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
LMNTD1-209ENST00000542224 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
LMNTD1-209ENST00000542224 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
LMNTD1-209ENST00000542224 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
LMNTD1-209ENST00000542224 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
LMNTD1-209ENST00000542224 CLCN6P51797 869 aa10.21□□□□□ -0.77
LMNTD1-209ENST00000542224 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
LMNTD1-209ENST00000542224 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
LMNTD1-209ENST00000542224 ZBTB22O15209 634 aa10.14□□□□□ -0.79
LMNTD1-209ENST00000542224 MKRN4PQ13434 485 aaPredicted RBP10.13□□□□□ -0.79
LMNTD1-209ENST00000542224 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
LMNTD1-209ENST00000542224 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
LMNTD1-209ENST00000542224 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
LMNTD1-209ENST00000542224 POTEMA6NI47 508 aa10.02□□□□□ -0.81
LMNTD1-209ENST00000542224 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
LMNTD1-209ENST00000542224 OTUD5Q96G74 571 aa10□□□□□ -0.81
LMNTD1-209ENST00000542224 ZRANB1Q9UGI0 708 aa9.99□□□□□ -0.81
LMNTD1-209ENST00000542224 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
LMNTD1-209ENST00000542224 ZNF579Q8NAF0 562 aaKnown RBP9.97□□□□□ -0.81
LMNTD1-209ENST00000542224 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
LMNTD1-209ENST00000542224 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
LMNTD1-209ENST00000542224 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
LMNTD1-209ENST00000542224 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
LMNTD1-209ENST00000542224 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
LMNTD1-209ENST00000542224 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
LMNTD1-209ENST00000542224 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
LMNTD1-209ENST00000542224 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
LMNTD1-209ENST00000542224 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
LMNTD1-209ENST00000542224 FAM163AQ96GL9 167 aaPredicted RBP9.74□□□□□ -0.85
LMNTD1-209ENST00000542224 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
LMNTD1-209ENST00000542224 C7P10643 843 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms