RNA–Protein interactions for RNA: ENST00000540743.1

CLEC2B-204, Transcript of C-type lectin domain family 2 member B, humanhuman

TSL 1 (best)

Gene CLEC2B, Length 994 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC2B-204ENST00000540743 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
CLEC2B-204ENST00000540743 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
CLEC2B-204ENST00000540743 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
CLEC2B-204ENST00000540743 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
CLEC2B-204ENST00000540743 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
CLEC2B-204ENST00000540743 FOXD1Q16676 465 aa23.34■■□□□ 1.33
CLEC2B-204ENST00000540743 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
CLEC2B-204ENST00000540743 ADRA2BP18089 450 aa22.38■■□□□ 1.17
CLEC2B-204ENST00000540743 PIAS4Q8N2W9 510 aaPredicted RBP21.99■■□□□ 1.11
CLEC2B-204ENST00000540743 MSH5O43196 834 aa21.51■■□□□ 1.03
CLEC2B-204ENST00000540743 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
CLEC2B-204ENST00000540743 PPP4R3CPQ6ZMV5 832 aa20.59■□□□□ 0.89
CLEC2B-204ENST00000540743 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
CLEC2B-204ENST00000540743 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
CLEC2B-204ENST00000540743 KCNA4P22459 653 aa20.06■□□□□ 0.8
CLEC2B-204ENST00000540743 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
CLEC2B-204ENST00000540743 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
CLEC2B-204ENST00000540743 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
CLEC2B-204ENST00000540743 NPM3O75607 178 aaKnown RBP19.75■□□□□ 0.75
CLEC2B-204ENST00000540743 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
CLEC2B-204ENST00000540743 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
CLEC2B-204ENST00000540743 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
CLEC2B-204ENST00000540743 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
CLEC2B-204ENST00000540743 SLC4A1APQ9BWU0 796 aaKnown RBP19.08■□□□□ 0.64
CLEC2B-204ENST00000540743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLEC2B-204ENST00000540743 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
CLEC2B-204ENST00000540743 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
CLEC2B-204ENST00000540743 ZBTB22O15209 634 aa18.47■□□□□ 0.55
CLEC2B-204ENST00000540743 FOXD4L1Q9NU39 408 aa18.46■□□□□ 0.55
CLEC2B-204ENST00000540743 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
CLEC2B-204ENST00000540743 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
CLEC2B-204ENST00000540743 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
CLEC2B-204ENST00000540743 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
CLEC2B-204ENST00000540743 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
CLEC2B-204ENST00000540743 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
CLEC2B-204ENST00000540743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
CLEC2B-204ENST00000540743 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
CLEC2B-204ENST00000540743 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
CLEC2B-204ENST00000540743 APLP2Q06481 763 aa17.9■□□□□ 0.46
CLEC2B-204ENST00000540743 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
CLEC2B-204ENST00000540743 CAPN15O75808 1086 aa17.83■□□□□ 0.44
CLEC2B-204ENST00000540743 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CLEC2B-204ENST00000540743 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
CLEC2B-204ENST00000540743 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
CLEC2B-204ENST00000540743 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CLEC2B-204ENST00000540743 DSG3P32926 999 aa17.53■□□□□ 0.4
CLEC2B-204ENST00000540743 ABCB7O75027 752 aa17.51■□□□□ 0.39
CLEC2B-204ENST00000540743 POLA2Q14181 598 aa17.41■□□□□ 0.38
CLEC2B-204ENST00000540743 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
CLEC2B-204ENST00000540743 FBLN2P98095 1184 aa17.01■□□□□ 0.31
CLEC2B-204ENST00000540743 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
CLEC2B-204ENST00000540743 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
CLEC2B-204ENST00000540743 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
CLEC2B-204ENST00000540743 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
CLEC2B-204ENST00000540743 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
CLEC2B-204ENST00000540743 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
CLEC2B-204ENST00000540743 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
CLEC2B-204ENST00000540743 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
CLEC2B-204ENST00000540743 FKBP8Q14318 412 aa16.54■□□□□ 0.24
CLEC2B-204ENST00000540743 SSUH2Q9Y2M2 353 aa16.51■□□□□ 0.23
CLEC2B-204ENST00000540743 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
CLEC2B-204ENST00000540743 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLEC2B-204ENST00000540743 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
CLEC2B-204ENST00000540743 POTEHQ6S545 545 aa16.32■□□□□ 0.2
CLEC2B-204ENST00000540743 PROM2Q8N271 834 aa16.27■□□□□ 0.2
CLEC2B-204ENST00000540743 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
CLEC2B-204ENST00000540743 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
CLEC2B-204ENST00000540743 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
CLEC2B-204ENST00000540743 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
CLEC2B-204ENST00000540743 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
CLEC2B-204ENST00000540743 PRR29P0C7W0 189 aa15.94■□□□□ 0.14
CLEC2B-204ENST00000540743 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
CLEC2B-204ENST00000540743 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLEC2B-204ENST00000540743 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
CLEC2B-204ENST00000540743 VASPP50552 380 aaPredicted RBP15.76■□□□□ 0.11
CLEC2B-204ENST00000540743 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
CLEC2B-204ENST00000540743 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
CLEC2B-204ENST00000540743 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
CLEC2B-204ENST00000540743 MIER1Q8N108 512 aa15.72■□□□□ 0.11
CLEC2B-204ENST00000540743 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
CLEC2B-204ENST00000540743 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
CLEC2B-204ENST00000540743 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
CLEC2B-204ENST00000540743 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
CLEC2B-204ENST00000540743 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
CLEC2B-204ENST00000540743 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
CLEC2B-204ENST00000540743 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
CLEC2B-204ENST00000540743 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLEC2B-204ENST00000540743 SPOCK2Q92563 424 aa15.35■□□□□ 0.05
CLEC2B-204ENST00000540743 HAX1O00165 279 aa15.34■□□□□ 0.05
CLEC2B-204ENST00000540743 NUBP1P53384 320 aa15.33■□□□□ 0.04
CLEC2B-204ENST00000540743 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
CLEC2B-204ENST00000540743 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
CLEC2B-204ENST00000540743 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
CLEC2B-204ENST00000540743 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
CLEC2B-204ENST00000540743 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
CLEC2B-204ENST00000540743 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
CLEC2B-204ENST00000540743 EVX2Q03828 476 aa15.22■□□□□ 0.03
CLEC2B-204ENST00000540743 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
CLEC2B-204ENST00000540743 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
CLEC2B-204ENST00000540743 DCAF8Q5TAQ9 597 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms