RNA–Protein interactions for RNA: ENST00000540118.1

CCDC77-209, Transcript of coiled-coil domain containing 77, humanhuman

TSL 2

Gene CCDC77, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC77-209ENST00000540118 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
CCDC77-209ENST00000540118 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
CCDC77-209ENST00000540118 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
CCDC77-209ENST00000540118 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CCDC77-209ENST00000540118 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
CCDC77-209ENST00000540118 FOXD1Q16676 465 aa18.51■□□□□ 0.55
CCDC77-209ENST00000540118 MSH5O43196 834 aa17.68■□□□□ 0.42
CCDC77-209ENST00000540118 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
CCDC77-209ENST00000540118 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
CCDC77-209ENST00000540118 ADRA2BP18089 450 aa16.5■□□□□ 0.23
CCDC77-209ENST00000540118 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CCDC77-209ENST00000540118 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
CCDC77-209ENST00000540118 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
CCDC77-209ENST00000540118 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
CCDC77-209ENST00000540118 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
CCDC77-209ENST00000540118 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
CCDC77-209ENST00000540118 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
CCDC77-209ENST00000540118 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
CCDC77-209ENST00000540118 POTEHQ6S545 545 aa14.65□□□□□ -0.06
CCDC77-209ENST00000540118 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
CCDC77-209ENST00000540118 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
CCDC77-209ENST00000540118 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
CCDC77-209ENST00000540118 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
CCDC77-209ENST00000540118 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
CCDC77-209ENST00000540118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC77-209ENST00000540118 DSG3P32926 999 aa13.73□□□□□ -0.21
CCDC77-209ENST00000540118 CAPN15O75808 1086 aa13.63□□□□□ -0.23
CCDC77-209ENST00000540118 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
CCDC77-209ENST00000540118 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
CCDC77-209ENST00000540118 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
CCDC77-209ENST00000540118 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
CCDC77-209ENST00000540118 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
CCDC77-209ENST00000540118 ABCB7O75027 752 aa13.22□□□□□ -0.29
CCDC77-209ENST00000540118 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
CCDC77-209ENST00000540118 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
CCDC77-209ENST00000540118 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
CCDC77-209ENST00000540118 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
CCDC77-209ENST00000540118 APLP2Q06481 763 aa12.98□□□□□ -0.33
CCDC77-209ENST00000540118 HAX1O00165 279 aa12.81□□□□□ -0.36
CCDC77-209ENST00000540118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
CCDC77-209ENST00000540118 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
CCDC77-209ENST00000540118 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
CCDC77-209ENST00000540118 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
CCDC77-209ENST00000540118 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
CCDC77-209ENST00000540118 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
CCDC77-209ENST00000540118 POLA2Q14181 598 aa12.6□□□□□ -0.39
CCDC77-209ENST00000540118 EVX2Q03828 476 aa12.54□□□□□ -0.4
CCDC77-209ENST00000540118 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
CCDC77-209ENST00000540118 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
CCDC77-209ENST00000540118 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC77-209ENST00000540118 LHX8Q68G74 356 aa12.46□□□□□ -0.41
CCDC77-209ENST00000540118 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
CCDC77-209ENST00000540118 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
CCDC77-209ENST00000540118 GABBR2O75899 941 aa12.2□□□□□ -0.46
CCDC77-209ENST00000540118 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
CCDC77-209ENST00000540118 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
CCDC77-209ENST00000540118 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
CCDC77-209ENST00000540118 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
CCDC77-209ENST00000540118 KCNA4P22459 653 aa11.97□□□□□ -0.49
CCDC77-209ENST00000540118 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
CCDC77-209ENST00000540118 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
CCDC77-209ENST00000540118 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
CCDC77-209ENST00000540118 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
CCDC77-209ENST00000540118 POTEMA6NI47 508 aa11.78□□□□□ -0.52
CCDC77-209ENST00000540118 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
CCDC77-209ENST00000540118 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
CCDC77-209ENST00000540118 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
CCDC77-209ENST00000540118 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
CCDC77-209ENST00000540118 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
CCDC77-209ENST00000540118 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
CCDC77-209ENST00000540118 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
CCDC77-209ENST00000540118 CLCN6P51797 869 aa11.64□□□□□ -0.55
CCDC77-209ENST00000540118 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
CCDC77-209ENST00000540118 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
CCDC77-209ENST00000540118 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
CCDC77-209ENST00000540118 FBLN2P98095 1184 aa11.54□□□□□ -0.56
CCDC77-209ENST00000540118 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
CCDC77-209ENST00000540118 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
CCDC77-209ENST00000540118 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
CCDC77-209ENST00000540118 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
CCDC77-209ENST00000540118 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CCDC77-209ENST00000540118 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
CCDC77-209ENST00000540118 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
CCDC77-209ENST00000540118 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
CCDC77-209ENST00000540118 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC77-209ENST00000540118 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
CCDC77-209ENST00000540118 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
CCDC77-209ENST00000540118 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
CCDC77-209ENST00000540118 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
CCDC77-209ENST00000540118 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
CCDC77-209ENST00000540118 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
CCDC77-209ENST00000540118 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
CCDC77-209ENST00000540118 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
CCDC77-209ENST00000540118 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
CCDC77-209ENST00000540118 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
CCDC77-209ENST00000540118 C7P10643 843 aa11.08□□□□□ -0.64
CCDC77-209ENST00000540118 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
CCDC77-209ENST00000540118 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
CCDC77-209ENST00000540118 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
CCDC77-209ENST00000540118 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms